Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01201 ATGGCTAAAGAATTTCCTCCAACCCATTTTTTCAAGATCATGTGTGATCAAAGCCTTGATCAAGGAAAGCTTATGATCCCAAGAAAGTTTGTGGAGAAATATGGAAAAGGTTTATCAAATGCTATATATCTAAAGACTGCAAGTGGTGCAAAGTGGAAATTAGATTTGGTAAAAAGTGATGGAAAAATGTGGTTTGAAAAGGGTTGGAAAGAATTTGTGAAGTATCATTCTCTAGCTCAAGGTCATCTTCTGCTTTTCAAATATGGAAGAACTTCCCATTTCCATGTGCACATCTTCGACAAGAGTGCCTTAGAGATACAACACCCTTTCCAAAGAGTTGAAGCTAAATCTCCGAATGATGAAGATTTGAAGGACAATATAGCAAGTAGTAAAAAGAGAAAAACTAACCTGTCATTAGAATTTAATCAACCATGTGAAATTGGAAGCAGTGGTTGTGTTAAAGATGGGAAGTTGGAAAAGGTAGCAGCTTTGAATCATATTGAAAAAAAGTGTAAAGGAAAGCAATTGGCTATTGCAAAGAAAACCTTTGACAGAGCAAACTCTATGAGAACCTGTAATCCATCCTTTATTGCTGTCATGCGTCCATCATACATTGATGCTGCTTGTAATCTGAACATACCAAGTGAGTTTGGTAAAAGACACTTATTACGTTTAGGCAAAAAGCAAGGAGATATTCATCTTAGGTTGTTAAATGGGAGAGTTTGGCCTGCAAGGTACCTAATTAGGAAAGGCAATAGAAAAGAAGAAAAATTTGAAATGTACTCAAGTGAATGGAAGACATTTGCAGAAGACAACAACTTGAAAGTTGGTGATGTTTGCACTTTTGAGCTCTTTCCTACTAGCACTATACTTACCTTCATTGTTCACATCTTTAGGGATTCTTTTGAGATATAG 915 0.3596 MAKEFPPTHFFKIMCDQSLDQGKLMIPRKFVEKYGKGLSNAIYLKTASGAKWKLDLVKSDGKMWFEKGWKEFVKYHSLAQGHLLLFKYGRTSHFHVHIFDKSALEIQHPFQRVEAKSPNDEDLKDNIASSKKRKTNLSLEFNQPCEIGSSGCVKDGKLEKVAALNHIEKKCKGKQLAIAKKTFDRANSMRTCNPSFIAVMRPSYIDAACNLNIPSEFGKRHLLRLGKKQGDIHLRLLNGRVWPARYLIRKGNRKEEKFEMYSSEWKTFAEDNNLKVGDVCTFELFPTSTILTFIVHIFRDSFEI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01201 304 Pfam B3 DNA binding domain 10 101 IPR003340 GO:0003677
Mepo3g01201 304 Pfam B3 DNA binding domain 196 300 IPR003340 GO:0003677
Mepo3g01201 304 CDD B3_DNA 194 299 IPR003340 GO:0003677
Mepo3g01201 304 ProSiteProfiles B3 DNA-binding domain profile. 196 301 IPR003340 GO:0003677
Mepo3g01201 304 PANTHER B3 DOMAIN-CONTAINING 5 287 - -
Mepo3g01201 304 SUPERFAMILY DNA-binding pseudobarrel domain 7 102 IPR015300 -
Mepo3g01201 304 Gene3D - 3 103 IPR015300 -
Mepo3g01201 304 SUPERFAMILY DNA-binding pseudobarrel domain 190 300 IPR015300 -
Mepo3g01201 304 Gene3D - 177 301 IPR015300 -
Mepo3g01201 304 CDD B3_DNA 9 100 IPR003340 GO:0003677
Mepo3g01201 304 SMART B3_2 10 102 IPR003340 GO:0003677
Mepo3g01201 304 SMART B3_2 196 301 IPR003340 GO:0003677
Mepo3g01201 304 ProSiteProfiles B3 DNA-binding domain profile. 9 102 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01201 Mepo-Chr3 18225409 18227437 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01201 2 98 B3 DNA Binding Superfamily AT3G18990 33.000 7.14e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo3g01201 B3 3.7e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01201 - - mtr:120577159 309.686