Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01169 ATGATACAACAACCTGAAAAAAGTTTCCAAAAACAATCTCCTCAATCTTCAAAGAAAGAAAAATTTAAGTCCAAAGTTCCTTCAAGGGCTTGTGGTGGAGGACAACAAGTTCTTGATTTGCTTCATGATTCATTGAGCAAGTTATGTAGCTCAAGATGGTTGGGAGGTGCAAAAAGAATTTGCAAACATAGGGGGGTGCAAAAAGGAAAAAAGAAAAATTCTTCAAGTAAGACTGTTTTTCATGACATGGATGGTGTACAATTTGCTGTCAAGATAGGAAGAGACAATCCAAGGATTTTCAGCTATGCAGAACTTTTCATAGGTTCAAATGGTTTCAATGAAGAACAAGTTCTAGGAAGTGGAGGCTTTGGAAAAGTGTACAAAGCACAATTGCCAAGTGATGGAACTTTGGTTGCTGTGAAATGCTGTTTATCAGAGAAAGGTAAACAATTTGACAAGAGTTTCTTAGCTGAATTAAACGCCGTGGCCGATCTTCGACACAAGAATCTTGTCAGGTTGAGAGGTTGGTGTGTTCATGAAGATCAATTACATCTTGTTTATGATTACATGCCTAACCGAAGCCTTGATCGAGTACTTTTTCGACGGCTGGAGAATTTGAAAAATGAGCCACTTGGTTGGGGACAAAGAGGTAAGATTGTTAAAGGTTTGGCTGCTGCATTGTATTATCTGCATGAACAGTTAGAGACTCAAATCATTCATAGAGATGTTAAAACAAGTAATGTTATGCTTGATTCTCATTACAATGCTAAGTTAGGTGATTTCGGCATGGCAAGGTGGTTAGAACATGAACTTGAATTTGAGTTCAAGTACAAGTACAATTACAGCAGCAACAATAAGAAGACATCAAGTAGAATTGATCATTTCAAATTGGGAGAAACATCGAGAATTGGCGGAACAATTGGTTATCTTCCACCAGAAAGCTTGCAAAAACTAAGCAATGGAACTTCCAAATGTGATGTATTTAGCTTTGGTATTGTTGTGCTTGAAATTGTATCTGGAAGGAGAGCAATTGATCTAGCATACCCTGATGATAAAATCATTTTGATTGATTGGATCAGAAGCCTTTGTGATGAAGGAAAGCTTCTAGAAGCAGCTGATACAAGGTTACAGAAAGATGGATCATACAATTTTTCTGAGATGAAGCATTTCCTTCATATAAGTCTTCTTTGCACACTTCATGATCCAAATTTGAGGCCTAATATGAAATGGGTTGTGGAAGCACTTTCTGATTTAAGTTTCAAACTTCCTTCACTTCCTTCATTTCTATCTCATCCTCTTTATATCTCTCTGTCTTCACCTTCTGAAACTACCAGTACTAGTAGCACAAGTGGCACGATCTCGGCCACAGAAAATCTTAGCTTAATCATAAACTATAGTTCATCAAACTATGTTACAGCTGCAGGTGAAACAGTTTATGTAACAGCTGAACACAAAAACAGTGGAATCAGGTCTTCTAAGAGCATGAATCAGAATCATTACAAGCCAAATTTTCCTGTGGTTGAAACTCCAAGAGAAATTTCGTACAAAGAGATTGTTTGTGCTACAAGTAACTTCTCCGAGTCGAGAAGGGTAGCAGAACTTGACTTTGGAACTGCTTATCATGGAATCCTCGACGACAATTGTCATGTTTTGGTGAAAAGGTTAGGGATGAAGACATGTCCTGCCCTGCGCGACAGATTCTCAAACGAACTCAGGAATCTAGGAAAGCTTCGACATCGGAATTTGGTTCAGCTTCGCGGATGGTGCACCGAACAAGGAGAGATGCTTGTGGTTTATGATTACTCGGCTAGTAGAATTCTCAGTCAACAACTTCAACAAATTCATAACAAAGGTAGGAACGATTATCGATGTTCGGTACTCGAATGGCATCATAGGTACAACATAGTGAAATCACTTGCTTCTGCAGTTCTTTATCTACATGAAGAATGGGATGAACAAGTGATTCACAGAAACATTACCTCTTCAGCTGTGATACTTGAACAAGATATGAATCCAAGACTTAGTAGTTTTGCTCTAGCTGAATTTTTGTCAAGAAATGAACATGGCCACCATGTAGTCAATGATACTACCAAATCAGTTAAAGGGATTTTCGGTTATATGTCACCGGAATATGTCGACTCAGGCGAAGCCACCTCTGCGGCCGATGTTTATAGTTTTGGCGTGGTGGTGCTTGAAATTGTTAGTGGAATGATGGCGGTGGATTTCAGGTACCAAGAGGTTCTTTTGGTGAAGAAGGTTCATGAATTTGTGATAAGAAAAAGACCATTGAAGGAATTAGCTGATATAAGACTGAATGGAGAGTATAATGAAAAAGAATTGATAAGGTTGGTAAGATTAGGAATTGCATGCACTAGTTGTGATCCTCAATTAAGACCAAGCATGAGACAAATTGTGAGCATTCTTGATGGAAATGACAAATTACTCAACATGAAGAACAAGGAAAGTAGGGAAGAATGGAGAGACAGAAATGCTTGTTCTTTATCAATGATTCGCAGAATTCAAGCTCTAGGAATACAGTAA 2541 0.3833 MIQQPEKSFQKQSPQSSKKEKFKSKVPSRACGGGQQVLDLLHDSLSKLCSSRWLGGAKRICKHRGVQKGKKKNSSSKTVFHDMDGVQFAVKIGRDNPRIFSYAELFIGSNGFNEEQVLGSGGFGKVYKAQLPSDGTLVAVKCCLSEKGKQFDKSFLAELNAVADLRHKNLVRLRGWCVHEDQLHLVYDYMPNRSLDRVLFRRLENLKNEPLGWGQRGKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNAKLGDFGMARWLEHELEFEFKYKYNYSSNNKKTSSRIDHFKLGETSRIGGTIGYLPPESLQKLSNGTSKCDVFSFGIVVLEIVSGRRAIDLAYPDDKIILIDWIRSLCDEGKLLEAADTRLQKDGSYNFSEMKHFLHISLLCTLHDPNLRPNMKWVVEALSDLSFKLPSLPSFLSHPLYISLSSPSETTSTSSTSGTISATENLSLIINYSSSNYVTAAGETVYVTAEHKNSGIRSSKSMNQNHYKPNFPVVETPREISYKEIVCATSNFSESRRVAELDFGTAYHGILDDNCHVLVKRLGMKTCPALRDRFSNELRNLGKLRHRNLVQLRGWCTEQGEMLVVYDYSASRILSQQLQQIHNKGRNDYRCSVLEWHHRYNIVKSLASAVLYLHEEWDEQVIHRNITSSAVILEQDMNPRLSSFALAEFLSRNEHGHHVVNDTTKSVKGIFGYMSPEYVDSGEATSAADVYSFGVVVLEIVSGMMAVDFRYQEVLLVKKVHEFVIRKRPLKELADIRLNGEYNEKELIRLVRLGIACTSCDPQLRPSMRQIVSILDGNDKLLNMKNKESREEWRDRNACSLSMIRRIQALGIQ 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01169 846 ProSiteProfiles Protein kinase domain profile. 525 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01169 846 FunFam Receptor like protein kinase S.2 603 831 - -
Mepo3g01169 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Mepo3g01169 846 Gene3D Phosphorylase Kinase; domain 1 484 601 - -
Mepo3g01169 846 Pfam Protein tyrosine and serine/threonine kinase 530 808 IPR001245 GO:0004672|GO:0006468
Mepo3g01169 846 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Mepo3g01169 846 MobiDBLite consensus disorder prediction 1 28 - -
Mepo3g01169 846 Gene3D Transferase(Phosphotransferase) domain 1 608 834 - -
Mepo3g01169 846 Gene3D Phosphorylase Kinase; domain 1 85 189 - -
Mepo3g01169 846 FunFam Receptor like protein kinase S.2 483 601 - -
Mepo3g01169 846 Gene3D Transferase(Phosphotransferase) domain 1 190 421 - -
Mepo3g01169 846 Pfam Protein kinase domain 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01169 846 SUPERFAMILY Protein kinase-like (PK-like) 96 444 IPR011009 -
Mepo3g01169 846 ProSiteProfiles Protein kinase domain profile. 112 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01169 846 SUPERFAMILY Protein kinase-like (PK-like) 500 808 IPR011009 -
Mepo3g01169 846 PANTHER - 75 417 - -
Mepo3g01169 846 FunFam Receptor like protein kinase S.2 190 421 - -
Mepo3g01169 846 SMART serkin_6 112 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01169 Mepo-Chr3 17893868 17896408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01169 510 816 Receptor kinase-like Gene Family AT3G59740 32.903 2.16e-45 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo3g01169 PK_Tyr_Ser-Thr 2.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01169 - - gmx:100796108 1256.89