Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01160 ATGGAAACCGTGCATGGCTACCTAAACACTGACAAAGGATTTTGGAATTTCTACCAAAACAATTCCCTTCAATCTGGTAAACCTACAGAACCTCAAATCCAAGAAATGATGTTTAAGCTCCAAGAACATCTTTATTCCTTTGATAGAACTGAAAACAACCCCTTTGATGCTGATCAAAGATTTGTTCTTGTTGACAAGAACCAACAAAAGAGTGATCAAGTAAAGAATGATGAAATTTTGACCAAAGTTACTCATACAATCAAAGGCAAATGGACTGCAGATGATGACAGCATTCTTGTCCAGTTCGTGAGTTTGTTAGGGCTTAAACAATGGTCATATATTGCTGAATTCTTGGATGGAAAGACTGGGAAACAGTGTTGGGAGAGATGGACTAACCATCTTCAACCAAATATTAGGAAGGGGCCATGGAATGAAGAGGAGGATGCAATTCTAATTGATGCTCATAAAGAAGTTGGGAACAAGTGGGCAGAAATTTCAAAGAGATTGCAAGGCCGTACTGAGAATTCCATCAAGAATCATTGGAATGCTACTAAGAGGAGTCTGAAATCCAAGATGAAAGAAAAGAGGAGTAACACTGGTCCAAGAAGAAAATTGCTTCAAAACTATATTAAGGAAGTAACTGTTGCTCAAGAAGGTGAAAAGGAAATGATGGATAGTAGGAATGAGGATGACAACAATGACTTCAACTATGAAGATTGGGCAACTCAAGAGGATGATGTTGGTGGCTATATTGATGGAAATGAAATGAAAAATGGATATGGCATAATGGATTATGGCGTTGGGATCTAG 810 0.3802 METVHGYLNTDKGFWNFYQNNSLQSGKPTEPQIQEMMFKLQEHLYSFDRTENNPFDADQRFVLVDKNQQKSDQVKNDEILTKVTHTIKGKWTADDDSILVQFVSLLGLKQWSYIAEFLDGKTGKQCWERWTNHLQPNIRKGPWNEEEDAILIDAHKEVGNKWAEISKRLQGRTENSIKNHWNATKRSLKSKMKEKRSNTGPRRKLLQNYIKEVTVAQEGEKEMMDSRNEDDNNDFNYEDWATQEDDVGGYIDGNEMKNGYGIMDYGVGI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01160 269 Gene3D - 87 139 - -
Mepo3g01160 269 CDD SANT 142 185 IPR001005 -
Mepo3g01160 269 PANTHER MYB PROTEIN-RELATED 76 200 - -
Mepo3g01160 269 ProSiteProfiles Myb-like domain profile. 135 185 IPR001005 -
Mepo3g01160 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 134 IPR017930 -
Mepo3g01160 269 SMART sant 139 187 IPR001005 -
Mepo3g01160 269 SMART sant 87 136 IPR001005 -
Mepo3g01160 269 SUPERFAMILY Homeodomain-like 86 181 IPR009057 -
Mepo3g01160 269 CDD SANT 90 134 IPR001005 -
Mepo3g01160 269 ProSiteProfiles Myb-like domain profile. 88 134 IPR001005 -
Mepo3g01160 269 FunFam Transcriptional activator Myb isoform A 87 139 - -
Mepo3g01160 269 Pfam Myb-like DNA-binding domain 140 182 IPR001005 -
Mepo3g01160 269 Pfam Myb-like DNA-binding domain 88 134 IPR001005 -
Mepo3g01160 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 135 189 IPR017930 -
Mepo3g01160 269 Gene3D - 142 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01160 Mepo-Chr3 17753747 17755331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01160 81 216 MYB Transcription Factor Family AT4G18770 58.088 2.21e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g01160 Myb_DNA-binding 4.6e-12 CL0123