Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01137 ATGACCAAGACTAAGCCCTTCTCTTCCACTACGAACCAACAACACAAACCATTTCAAGTCTCCAACAGGAACTTTACTGAAAGATCATTGTTGTTCAAGAATGTCAGCACAAGGAGAGTATTGTCAAAGGTTCAAAGAAACGCTGAAACCAAGGAAACACCAATCAAGAAACTGCAATTAAAACGTTGTTCTGCATATGAACCTTCAGCTAACAAAAAGAACTTAGGGATTGAGAGGAAAGAAAGCATCAATGATAAAAACATACCGTTTTTGACTTCCGATGACTCAAGAAGAAAGAAAGTAAAAACTACCTTAGGTAACTTCCGTGCTCTCTGTGGAAAACTCGGTAAGGAATTTACCGGCGATGCACTTCCTATCAAAGTGTCACGGGTTCTAAAACTAAGAGGCAAGTTCATTGATGATGGGAAAAAAATTATTGGAAAAGTCCCTGGAATTGAAGTAGGTGACAAGTTTCAGTATTGGCAAGAACTCAATGTTGTTGGTCTTCATCGTCAGAATCTAAGTCTCATTGATTACGTGATAGAGAATGGGAATTTGGTTGCAACTAGCGTTGTTTCTTGTCATTTTGATGATATGGATGATACAAAAGTGTTTGTTTATACAGAGGAAGGAGGTAATGTCATTAATTCTGGAGAATGTGATAAAGGGAATCTTTCTCTGATGAATAGTTATGATGTTGAGAATCCTATTAGAGTTATTATAAAGTTTAATTCAAAGAACGGTGGTGGTTGTGCACGTGGTGGAGGTGAGGTGTATTGTTACTATGGTCTTTATAAAGTTGAATCTATTTGGAAAAGAAAAAGGAAATTAGATTTTAAATTTTGTTTGGTTAGATTGCCTGATCAGAAATTTTTTGTTAAAGATATTTCCAATGGAAAAGAAGCTGTTCCTATATGTGTGGTTAATCGTATAGATTCTAACAAGGTTCCATATTTTCAATACATTACTCGTAACATTTATCCTGAATGGCTTTTCAATGATTCCTCTGTTGGGCGTAAATGTGTTGATCATTGTTTTGATTCAATGAAATGTTCCTGTGCTCTTAAGAGTGGAGGGAAAATTACTAGAGTAAAGAAAAATGAGATTAAATTTAAGCTTCAAATTTTCAAAACTAAGGCGAAAGGATGGGGTGTGAGATCAGAGAATGCAATTCCTGCTGGAAATTTTATTTGTGAGTATTTAGGTGAGATTATTGAAGATGAGGAAGCTTTGAAAATAGTTGATAATGATGACTATTTATTTAATATTGGCAATTATATTCACAAGGTCTATAGTTCGTGGGAAGAGGATTCATATATTGTTGATAGTAAGGAGATGAGTTCATATCAACCCTTAGAAGCTTCAGGTGGTAAAGAGGTCATTGATGATCGATGTGATAGTGGTAGGTTTACCATTGATGCTGCTAAGTATGGTAACATGGCAAGGTTTATCAACCATAGTTGTTCTCCCAATTTGTTTGCTCGAAATGTTCTTTACGATGATGATGATCTGAGGATTCCACACATCATGCTATATGCAGCTGTGGACATTCCGAGCATGAATGAGTTGACTTTGAATTACAATTACAAGATCGATCAAGTGATTGATTCAAATGGAAATTTAAAGATGAAAGCATGTTATTGTGGAGCTTCTGAATGCATCCGTCGACTGTATTGA 1677 0.356 MTKTKPFSSTTNQQHKPFQVSNRNFTERSLLFKNVSTRRVLSKVQRNAETKETPIKKLQLKRCSAYEPSANKKNLGIERKESINDKNIPFLTSDDSRRKKVKTTLGNFRALCGKLGKEFTGDALPIKVSRVLKLRGKFIDDGKKIIGKVPGIEVGDKFQYWQELNVVGLHRQNLSLIDYVIENGNLVATSVVSCHFDDMDDTKVFVYTEEGGNVINSGECDKGNLSLMNSYDVENPIRVIIKFNSKNGGGCARGGGEVYCYYGLYKVESIWKRKRKLDFKFCLVRLPDQKFFVKDISNGKEAVPICVVNRIDSNKVPYFQYITRNIYPEWLFNDSSVGRKCVDHCFDSMKCSCALKSGGKITRVKKNEIKFKLQIFKTKAKGWGVRSENAIPAGNFICEYLGEIIEDEEALKIVDNDDYLFNIGNYIHKVYSSWEEDSYIVDSKEMSSYQPLEASGGKEVIDDRCDSGRFTIDAAKYGNMARFINHSCSPNLFARNVLYDDDDLRIPHIMLYAAVDIPSMNELTLNYNYKIDQVIDSNGNLKMKACYCGASECIRRLY 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01137 558 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g01137 558 SMART preset_2 293 381 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g01137 558 SUPERFAMILY SET domain 286 534 IPR046341 -
Mepo3g01137 558 SMART G9a_1 142 289 IPR003105 -
Mepo3g01137 558 Pfam Pre-SET motif 296 363 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g01137 558 ProSiteProfiles YDG domain profile. 147 288 IPR003105 -
Mepo3g01137 558 ProSiteProfiles Post-SET domain profile. 542 558 IPR003616 -
Mepo3g01137 558 Pfam SET domain 382 528 IPR001214 GO:0005515
Mepo3g01137 558 SUPERFAMILY PUA domain-like 142 290 IPR015947 -
Mepo3g01137 558 ProSiteProfiles SET domain profile. 371 528 IPR001214 GO:0005515
Mepo3g01137 558 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 12 552 - -
Mepo3g01137 558 Pfam SAD/SRA domain 146 289 IPR003105 -
Mepo3g01137 558 SMART set_7 371 534 IPR001214 GO:0005515
Mepo3g01137 558 Gene3D SET domain 291 558 IPR046341 -
Mepo3g01137 558 Gene3D - 144 290 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01137 Mepo-Chr3 17361414 17363090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01137 134 558 EF-hand Containing Proteins AT5G13960 31.809 2.98e-61 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g01137 SET 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01137 K11420 - mtr:25499868 934.48