Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01130 ATGAAGTGTGTAGACTTTTGGCTGTTTTTCTCAATGTACTTTTGTGCACTCATAACTGACCCTTCCTCTTCTTCTTCTGTGGTTGGTTCTTCCATTACTATTTCTTCTGCTTCATCCACTTTACAAAGCCAAGAAGCAAGTGCTTTGTTGAAGTGGAAAGCAAGTCTTGACAACCAAAGCAAAGTGTTGCTATCTTCATGGAGTGGCAATAATTCATGCAACTGGTTGGGAATTACGTGTGATGAAAATTCCTTGTCTGTCTCTAATGTATATCTCACAAATATGAAATTGAAAGGTACACTCGAAAATCTTAACTTCTCATCACTTCCAAACATTCTCACTCTTGATCTTAGTTACAATAATTTCTCGGGAACAATCCCATATCAAATCACACATTTGACCGATCTTCGAATTTTATATTTGTATAGTAATATTTTTAATGGTACCATTCCTAAAGAAATAGGGAACTTGTCCTTCTTGTCACAGTTGCATCTAGATCACAACAAGCTTTCTGGATCTATTCCACGAGAAATTGGAAAGTTATTGAACATAAAACGTGTATCTCTTCAAGATAATATTCTTTCTGGTTTCATTCCTAGTAAAATTGGAATGATGAGATCATTGCTTTTTTTTGATTTGTCAAACAATCTACTCTCCGGTAAAATCCCACCTACTATTGGAAACTTGAGCCATTTATATTATCTTGGCTTTCATGCAAACCATCTCAGTGGGGCTATTCCAACAGAATTGAATATGCTTGTTAATTTGGGAACATTCCATGTATCTGACAACAATTTCATTGGTCAGTTGCCTCATAACATTTGTCTTGGTGGTAACTTGAAATTTTTTATTGCTTTAGATAACCATTTTACTGGTAAAGTTCCAAAAAGTTTGAAGAATTGCTCTAGCCTTATTAGACTTAGGCTTGAACATAACCATATGGATGGAAACATAACAGATGATTTGGGTGTATACCCAAATTTGGAGTTCATGGGATTGGGTGACAATAATTTTTATGGTCACCTTTCAACTAATTGGGGAAAGTTTCATAACCTGGAGCAAATTAATATCTCCAAAAATAATATATCAGGTTGCATACCACCCGAACTAAGTGAAGCGGTCAACTTATATTCAATTGACTTATCTTTAAATCATCTCACAGGAAAAATTCCAAAGGAGTTGGGAAATTTGACTAAGTTGGGTAGACTCTTTTTAAGCAACAACCATCTTTCTGGCAATGTTCCTACACAAATAGCATCGTTAAAAGAACTTGAAATCTTAGATGTTGCAGAAAATAATCTAAATGGCTTCATCAGAACAGAACTTGTCATTTTGCCTAATTTATGGAACTTAAATTTGAGCCAAAACAAATTCAGAGGAAATATTCCTAATGAGTTTGGAAAATTTAAAGCCCTTCAAAGTCTTGATCTCGGTGGAAATTTTTTGGATGGAACCATACCACCAATGTTTGTAAAGCTGATACTCTTAGAAACATTGAATATTTCACATAACAATCTTTCTGGCAATATCCCCTCTTCCTTCGACCAGATGATTAGTTTGTCATTTATTGATATATCATATAACCAATTTGAGGGTCCACTTCCAAATATGCGAGTATTCAATAACGCTACAATTGAAGTGTTGAGAAATAATACAGGCTTGTGCGGTAATGTTTCTGGCTTGGAGTCTTGCATAAAACCAAGCAGTGGTTCTCATAACCATAAGATTAAGAAAGTGATCTTATTGATAGTTTTGCCTCTTGCACCAGGAACTTTAATGCTAGCATTTGTTTGTTTCAAATTCTCATCTCATCTATGCCAAATGTTAGCCACAAGAAACAACCAGGTTGGAGGAAACAACGTTGCTCCTAAAAAAGTATTTTCAATTTGGAGTTTTGATGGGAAAATGGTGTATGAGAACATTATTGAAGCAACGGAAGAGTTTGATGACAAGCATCTCATTGGAGTAGGAGCGCAAGGAAGTGTTTACAAAGCAGAGTTGCCCACAGGTCAAGTAGTTGCTGTTAAAAAACTCCATTCAGCAACAAATAGGGAAAATTCTGATCTAAACTGTTTCGCAACTGAGATCCAAGCTCTGACAGAAATTCGGCATCGTAACATTCTGAAGCTATATGGATATTGTTCACACTCCCACTTGTCGTTTTTGGTTTACGAGTTCATGGAGAAAGATAGTTTGGAAAAGATTTTGAAAGATGATGAAGAAGCAATTGCATTTGATTGGAATAAGCGGGTGAATGTCATTAAAGATGTAGCTAGTGCTTTATGCTATATGCACCATGATTGCTCACCTCCAATTGTTCATCGAGATATATCAAGCAAGAATATTCTTCTGGATTTAGAATATGTGGCTCGTGTCTCGGACTTTGGAACTGCTAAGCTTCTTAATCCTAATTCAGACAATTGGACCTCATTTGCAGGCACATATGGATATGCTGCTCCAGAATTTGCATACACAATGGAAGTGAATGAGAAGTGTGATGTGTATAGTTTTGGGGTATTGGCATTGGAAATACTATATGGAAAACACCCTGGAGATATTATATCTAACTCTTTACAATGGACAATCATGGACTCAACACTTGATTCCACGCCATTGATGGATGAGTTGGATCAACGTCTCCCTTGTCCGATGAATCATATAGCTAAGAAGTTAGTATCCATTGCAAAGACAACAATTTCTTGCTTAGCTGAACGTTCACGATCTCGCCCTACCATGGAGCAGGTTTCTAGGGAGCTTTTAACGGCATAG 2769 0.364 MKCVDFWLFFSMYFCALITDPSSSSSVVGSSITISSASSTLQSQEASALLKWKASLDNQSKVLLSSWSGNNSCNWLGITCDENSLSVSNVYLTNMKLKGTLENLNFSSLPNILTLDLSYNNFSGTIPYQITHLTDLRILYLYSNIFNGTIPKEIGNLSFLSQLHLDHNKLSGSIPREIGKLLNIKRVSLQDNILSGFIPSKIGMMRSLLFFDLSNNLLSGKIPPTIGNLSHLYYLGFHANHLSGAIPTELNMLVNLGTFHVSDNNFIGQLPHNICLGGNLKFFIALDNHFTGKVPKSLKNCSSLIRLRLEHNHMDGNITDDLGVYPNLEFMGLGDNNFYGHLSTNWGKFHNLEQINISKNNISGCIPPELSEAVNLYSIDLSLNHLTGKIPKELGNLTKLGRLFLSNNHLSGNVPTQIASLKELEILDVAENNLNGFIRTELVILPNLWNLNLSQNKFRGNIPNEFGKFKALQSLDLGGNFLDGTIPPMFVKLILLETLNISHNNLSGNIPSSFDQMISLSFIDISYNQFEGPLPNMRVFNNATIEVLRNNTGLCGNVSGLESCIKPSSGSHNHKIKKVILLIVLPLAPGTLMLAFVCFKFSSHLCQMLATRNNQVGGNNVAPKKVFSIWSFDGKMVYENIIEATEEFDDKHLIGVGAQGSVYKAELPTGQVVAVKKLHSATNRENSDLNCFATEIQALTEIRHRNILKLYGYCSHSHLSFLVYEFMEKDSLEKILKDDEEAIAFDWNKRVNVIKDVASALCYMHHDCSPPIVHRDISSKNILLDLEYVARVSDFGTAKLLNPNSDNWTSFAGTYGYAAPEFAYTMEVNEKCDVYSFGVLALEILYGKHPGDIISNSLQWTIMDSTLDSTPLMDELDQRLPCPMNHIAKKLVSIAKTTISCLAERSRSRPTMEQVSRELLTA 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01130 922 SMART LRR_typ_2 253 277 IPR003591 -
Mepo3g01130 922 SMART LRR_typ_2 205 229 IPR003591 -
Mepo3g01130 922 SMART LRR_typ_2 109 133 IPR003591 -
Mepo3g01130 922 SMART LRR_typ_2 397 421 IPR003591 -
Mepo3g01130 922 SMART LRR_typ_2 493 516 IPR003591 -
Mepo3g01130 922 SMART LRR_typ_2 157 181 IPR003591 -
Mepo3g01130 922 SMART LRR_typ_2 445 468 IPR003591 -
Mepo3g01130 922 Gene3D Transferase(Phosphotransferase) domain 1 727 922 - -
Mepo3g01130 922 FunFam MDIS1-interacting receptor like kinase 2 727 922 - -
Mepo3g01130 922 Pfam Leucine rich repeat N-terminal domain 44 81 IPR013210 -
Mepo3g01130 922 Pfam Protein kinase domain 649 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01130 922 FunFam Nuclear pore complex protein NUP107 42 200 - -
Mepo3g01130 922 SUPERFAMILY Protein kinase-like (PK-like) 629 919 IPR011009 -
Mepo3g01130 922 ProSitePatterns Tyrosine protein kinases specific active-site signature. 772 784 IPR008266 GO:0004672|GO:0006468
Mepo3g01130 922 PANTHER LEUCINE RICH REPEAT KINASE 2 203 921 - -
Mepo3g01130 922 Gene3D Phosphorylase Kinase; domain 1 611 726 - -
Mepo3g01130 922 Gene3D Ribonuclease Inhibitor 44 159 IPR032675 -
Mepo3g01130 922 Gene3D Ribonuclease Inhibitor 160 229 IPR032675 -
Mepo3g01130 922 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 254 568 - -
Mepo3g01130 922 FunFam Leucine-rich repeat receptor protein kinase MSP1 611 726 - -
Mepo3g01130 922 ProSiteProfiles Protein kinase domain profile. 648 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01130 922 SUPERFAMILY L domain-like 300 556 - -
Mepo3g01130 922 SUPERFAMILY L domain-like 43 339 - -
Mepo3g01130 922 Pfam Leucine rich repeat 471 530 IPR001611 GO:0005515
Mepo3g01130 922 Gene3D Ribonuclease Inhibitor 233 566 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01130 Mepo-Chr3 17311489 17314558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01130 89 820 Receptor kinase-like Gene Family AT4G08850 43.876 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g01130 Pkinase 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01130 - - psat:127129328 1157.9