Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01126 ATGCGAGCATTTAATAATGCTACATTTGAGGTGTTGAGAAATAATGCAGGCTTGTGCGGTAATGTTTCTGGCTTAGAGTCTTCATTAAAACCAAGCAGGGGTTCTCATAACCATAAGATTAAGAAAGTGATCTTATTGATAGTTTTGCCTCTTGCACCAGGAACTCTAATGCTCGCATTTGTTTGTTTCAAATTCTCATCTCATCTATGCCAAATGTCAGCCACAAGAAACAACCAGGTTGGAGGAAACAACATTGCTCCTAAAAATGTATTTTCAATTTGGAGTTTTGATGGGAAAATGGTGTATGAGAACATTATTGAAGCAACGGAAGAGTTTGATGACAAGCATCTCAGTGGAGTAGGAGCACAAGGAAGTGTTTACAAAGCAGAGTTGCCCACAGGTCAAGTAGTTGTTGTTAAAAAACTCCATTCAGCAACAAATAGGGAAAATTCTGATCTTAATTATTTCGCAATTGAGATCCAAGCTCTGACAGAAATTCGGCATCGTAACATTGTGAAGCTATATGGATATTGTTCACACTCCCACTTGTCGTTTTTGGTTTACGAGTTCATGGAGAAAGGTAGTTTGGAAAAGATTTTGAAAGATGATGAAGAAGCTATTGCATTTGATTGGAAAAAGCGGGTGAATGTCATTAAAGATGTAGCTAGTGCTTTATGCTATATGCACCATGATTGCGCACCTCCAATTGTTCATCGAGATATATCAAGCAAGAATATTCTTCTGGATTTAGAATATGTGGCTCGTGTCTCGGACTTTGGAACTGCTAAGCTTCTTAATCCTAATTCAGACAATTGGACCTCATTTGCAGGCACCTATGGATATGCTGCTCCAGAATTTGCATACACAATGGAAGTGAATGAAAAGTGTGATGTGTATAGTTTTGGGGTATTGGCATTTGAAATACTATATGGAAAACACCCTGGAGATATTATATCTAACTCTTTACAATGGACAATCATGGACTCAACACTTGATTCCACGCCATTGATGGATGAGTTGGATCAACGTCTCCCTCGTCCGATGAATCATATAGCTAAGAAGTTAGTATCAATTGCAAAGACAACAATTTCTTGCTTAGCTGAGCGTTCACGATCTCGCCCTACCATGGAGCAGATAATGTTCCGTTTAATGTTCCAACATCATGCAGTAAACAGAATGAATAAACAGAAGGTAAATGACATGAAAGTAAATGGCACAGTGAGTTTGTTGACCCAGTTTCCATTAGAGAAGCAAGCCATCATTGTGATTGTTCCAAGTCCTGGTTTTAGTCATCTTTCACTCCTTGAATTTTCCAAACGCCTAATTCACCTCTCCAACTCCTTGCACATCACTTTTCTCATTCCAACACTTGATTCTCCACCTGAACCCTCCAAGTCCATTCTTCAAACTCTTCCTTCAACCATAAACTCCACTTTTCTTTCTTCAATCAACACCAACGATGATTTACCGAAGGGGACTCCATTAGCAGCCCATCTTCAACTCGCGGTAACTCGCTCTCTTCCATTCATCCACGACGCTTTAAAATCATTGAGTTTAACTTCAAATCTGGTCGCTCTTGTTGCTGATCTTTTTGCAAATGATGCACTTATTTGTGCAAAAGAACTAAACATTTTGTCCTTAATTTACTGTCCATCATCGGCTACAACACTTTCTTTCTGCTTGTTTCTACCAAAGCTTGATCAAATAGTAGTAGCTAATACTCAATTCAAAGACCTTCATGAACCTATTCAAATTCCTGGATGTGTACCAATAAACGGAAGAGATCTTCCAAACCCGGTTCAGGATCGAAATAGCATAGTATACAAATTATTTCTTCAAAAATGCAAACAACTCTTGCACACTGATGGAATCATAATCAACAGTTTCAAAGAAATTGAACAAGGACCTATAAAAGCATTGATGAAACAAATGGATATCCAATTGTTTATCCAATTGGACCAATTATCCAAACTGATTCTACTATCTAAAAAATGA 1995 0.3805 MRAFNNATFEVLRNNAGLCGNVSGLESSLKPSRGSHNHKIKKVILLIVLPLAPGTLMLAFVCFKFSSHLCQMSATRNNQVGGNNIAPKNVFSIWSFDGKMVYENIIEATEEFDDKHLSGVGAQGSVYKAELPTGQVVVVKKLHSATNRENSDLNYFAIEIQALTEIRHRNIVKLYGYCSHSHLSFLVYEFMEKGSLEKILKDDEEAIAFDWKKRVNVIKDVASALCYMHHDCAPPIVHRDISSKNILLDLEYVARVSDFGTAKLLNPNSDNWTSFAGTYGYAAPEFAYTMEVNEKCDVYSFGVLAFEILYGKHPGDIISNSLQWTIMDSTLDSTPLMDELDQRLPRPMNHIAKKLVSIAKTTISCLAERSRSRPTMEQIMFRLMFQHHAVNRMNKQKVNDMKVNGTVSLLTQFPLEKQAIIVIVPSPGFSHLSLLEFSKRLIHLSNSLHITFLIPTLDSPPEPSKSILQTLPSTINSTFLSSINTNDDLPKGTPLAAHLQLAVTRSLPFIHDALKSLSLTSNLVALVADLFANDALICAKELNILSLIYCPSSATTLSFCLFLPKLDQIVVANTQFKDLHEPIQIPGCVPINGRDLPNPVQDRNSIVYKLFLQKCKQLLHTDGIIINSFKEIEQGPIKALMKQMDIQLFIQLDQLSKLILLSKK 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01126 664 FunFam Leucine-rich repeat receptor protein kinase MSP1 75 190 - -
Mepo3g01126 664 PANTHER LEUCINE RICH REPEAT KINASE 2 2 384 - -
Mepo3g01126 664 FunFam MDIS1-interacting receptor like kinase 2 191 389 - -
Mepo3g01126 664 SUPERFAMILY Protein kinase-like (PK-like) 92 388 IPR011009 -
Mepo3g01126 664 ProSitePatterns Tyrosine protein kinases specific active-site signature. 236 248 IPR008266 GO:0004672|GO:0006468
Mepo3g01126 664 Pfam Protein kinase domain 117 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01126 664 Gene3D Glycogen Phosphorylase B; 416 650 - -
Mepo3g01126 664 Gene3D Phosphorylase Kinase; domain 1 73 190 - -
Mepo3g01126 664 ProSiteProfiles Protein kinase domain profile. 112 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01126 664 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 420 643 - -
Mepo3g01126 664 Gene3D Transferase(Phosphotransferase) domain 1 191 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01126 Mepo-Chr3 17256319 17260506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01126 3 284 Receptor kinase-like Gene Family AT4G08850 48.464 3.28e-80 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g01126 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01126 - - tpra:123888271 617.461