Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01116 ATGTTCTTTTACAAATCCAGATCGTTCTGGTTGTTCAGTGTAACATCCCAAATTTCTAGACCAGGTTGTTCTTCCAGCCTATCTCGCGCTTCTGTCTTGCTTTTGAGTAATCTGGTTTTGTTTTGCTTCAAAGATAATGCTGGTGTTATTGTGAATCCTAAGGGAGATGTGAAAGGTTCTGCTATCATTGGACCAATTGGTAAGGAGTGTGCTGATCTTTGGCCAAGGATTGCAAGTGCTGCCAATGCCATTGTATTTGTGTGGATTCTGCTTCAAGATTGCAAGTATTGCTAA 294 0.4082 MFFYKSRSFWLFSVTSQISRPGCSSSLSRASVLLLSNLVLFCFKDNAGVIVNPKGDVKGSAIIGPIGKECADLWPRIASAANAIVFVWILLQDCKYC 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01116 97 Gene3D Ribosomal protein L14 29 85 IPR036853 GO:0003735|GO:0005840|GO:0006412
Mepo3g01116 97 Pfam Ribosomal protein L14p/L23e 41 85 IPR000218 GO:0003735|GO:0005840|GO:0006412
Mepo3g01116 97 SUPERFAMILY Ribosomal protein L14 38 85 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01116 Mepo-Chr3 17157728 17158954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01116 39 85 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 85.106 2.15e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01116 K02894 - ming:122079164 86.2705