Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01109 ATGGAAAATGATGCTAATGAAAACTTCTTTAGCACATCCTCATCAACACCAACATCTTCTAACTCAAATTCAAATTCATGCACCAATCAAGAAACCAAAAATAGTCCTCAAAATGGAATTAAAAAATCCAAGAAAAGAGAGAGAAATGAAAATGACACAAAACACCCTACATATAGAGGTGTAAGAATGAGAGCATGGGGAAAATGGGTATCTGAAATCCGTGAGCCAAGAAAGAAGTCAAGAATATGGCTTGGAACATACCCTACAGCTGAAATGGCAGCTAGAGCTCATGATGTAGCTGCTTTAGCCATAAAGGGTCATTCAGCTTACCTCAATTTCCCTAATTTGGCTCAAAATCTTCCAAGGCCTTCAACCACTTCACCTAAGGACATTCAAGTTGCAGCTGCAAAAGCAGCAGCCATTGTGTTTGAGGAGATTAAGGAATGTTGCCAGGGTGAAAATGACCAACAACAAAACCAAGACCAAGATCAAGATCAAGTTTCATTTTCAACTCTTTCTTCCATAGATAATGTTCAAGAATCTAATTCAAGTTCTCCATCTAGTACTGCTACTACAAATGATGATATTGATGACACACTCTTTGATCTGCCAGATCTTTTTCCTGATGGAAAAAATGGATTTCTTTCTTATTCTTCTTCTTGGCATTTATGTGCTGTTGATAGTGGACTTCGCCTCGAGGAGCAACTTTCGTCATGGGAGTATTACTAG 729 0.3827 MENDANENFFSTSSSTPTSSNSNSNSCTNQETKNSPQNGIKKSKKRERNENDTKHPTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPNLAQNLPRPSTTSPKDIQVAAAKAAAIVFEEIKECCQGENDQQQNQDQDQDQVSFSTLSSIDNVQESNSSSPSSTATTNDDIDDTLFDLPDLFPDGKNGFLSYSSSWHLCAVDSGLRLEEQLSSWEYY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01109 242 MobiDBLite consensus disorder prediction 1 37 - -
Mepo3g01109 242 CDD AP2 58 116 IPR001471 GO:0003700|GO:0006355
Mepo3g01109 242 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Mepo3g01109 242 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Mepo3g01109 242 SUPERFAMILY DNA-binding domain 57 115 IPR016177 GO:0003677
Mepo3g01109 242 MobiDBLite consensus disorder prediction 1 59 - -
Mepo3g01109 242 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 32 209 - -
Mepo3g01109 242 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Mepo3g01109 242 MobiDBLite consensus disorder prediction 38 59 - -
Mepo3g01109 242 FunFam Ethylene-responsive transcription factor 2 56 115 - -
Mepo3g01109 242 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Mepo3g01109 242 MobiDBLite consensus disorder prediction 176 195 - -
Mepo3g01109 242 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Mepo3g01109 242 Pfam AP2 domain 56 107 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01109 Mepo-Chr3 17090361 17091594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01109 44 234 AP2-EREBP Transcription Factor Family AT2G44940 54.146 2.52e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g01109 AP2 2.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01109 - - psat:127129327 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01109 3 17090361 17091594 Mepo3g01109 3 17090361 17091594 ECH