Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01108 ATGGGGAGTATGGGTGAACATGATAGAAAACGGAGATTTAGCTCCTTGTCACCTACACCTGCTACTGCTAAGAAGCTACCCTTCTTGCCAGTTTCTGAGGACAAAAAGCTTGATATTGCTGTACTTCAGTATCAAAACCAAAAGCTTACACAGAAATTGGAGACTCAGAAGTTAGAATATGCAGCTCTTGAGAATAAATTTTCTCAACTGAAGGAGAAGCAACAGTCATATGATTCTACTTTAGCAGTGGTCAAGAAGTCTTGGGAACAGCTGGTTAACGATTTAGAGTCATGTTCTGAACATATAAGGGAGTCTAGCCGCAAAGTAGATTCCAGATTTGCATCAAGCACAGATGATGGTAGTTCGTCTACTGTTCAAGATGTTTTTCTTAGCCGACTCTTGCAAACTGGTGCAACTGAAAGTTCATCCTCTTGTCACTTTGCCAACGAGATGGAACAACATAGAGAAATTACTGCTGAAAAAGCTAAAAGCATTTTGAGCAATATAGTGACATCTATTAATAACTTTCAGTGTCTAAAAGATGGATTTCATACTGTATTACTGAAAAAGCTTAGAGGAGATGTTTCATGTGGGCAGATGTTATCCAATGATCTTGAGGTCGAAAGTAAAAACTTGAGATTGGCATTAAGTGAACTTCACTTAAAGCACAAGTCTTTAGCAAGTGATTTCCGAACTCACAGGGATCTAGATGCCAAAAATAAAGCGGAGCTTAAACGGTTAAAAGGGGAACTAGAAAGCACGGTTGCAGAGTTAGAAGAAAGCAATCAGAAACTTGCAACTCTTAAGGTAGAGAAAGACGCAGCCAAAGGGGCAGTTCTCCCAGTATTAGCTGTCGGGAATTCACTCATTCCTAATGATAAAATCAAAGACAAACAAAAGGATTTGCAAGATATGGAATCTACTTTGAAGGAATTATTGGACCAAGCTTCAACACGGGCAGTGGAACTGAAAAATCTTCATGAGGAAAGAATAAGGTTATTACAGCAATTGTGTGATCTACAGAACACATTGAAGAATTTGAAGTGTATTACCTCTTCCCATGCATTCCAATTGGTTAGAGATCAGATAGAAAAATCAAAATCGGAAGTGCAGGAGTATCAGGCCTTATATGAGAAACTACAGGCTGAGAAGGATAGTCTTACATGGAGGGAGAGGGAGTGGTACATTAAAAATGATTTAGCTGATCTTTTTCAAAGATCTGTGGAAGTTTCTGATCTTAAAGTGGCTGATATACGCACTGAGATACGGAAAACAATAGAGCAAAGAGATGTGATTGAAAATAAGCTGAAAGAGGAAGCAAGAGAACCAGGAAGGAAAGAAATTATTGCTGAATTTAAATCTCTTCTTTCCTCATTTCCTGAGGAAATGGGGTCCATGCAAAGTCAACTAAGTAAGTATAAAGAATCAGCTTCAGATATCCATTCTTTGCGTGCAGATGTGCATTCTATTTCCAGTATTCTCGATCGGAAGGTAAAAGAATGTGATGCATTATCTGTTAGGTCTGCTGGTCAACTTGCTGAGATAAATAGACTGCTTGCTGTGGTTCAAGATTTACGAGTGACTGAGGATGAGATGAAGTTGATTCTGCGAATGTTTAGACATGAGACCATTGATTCAAGGGATGTCATGGAAGCAAGGGAAGCAGAATACATAGCATGGGCACACGTTCAAACTTTGAAATCATCTCTTGATGAGCACAATTTAGAACTTCGAGTTAAGACAGCAAATGAATCAGAAGCCAGATCGCAGCAAAAACTTGCTGCGGCTGAAGCTGAGATTGCAGACATGAGACATAACTTAGATGATTCTAAAAGGGCGACATGTAAACAGTCTGATGTCATGAGATCTAAAAATGAAGAAAATGAAGCCTACTTATCTGAAATAGAGACTATTGGACAAGCATATGATGACATGCAAACCCAAAACCAACATCTGTTGCATCAGATTACTGAGAGAGATGACTACAATATTAAGCTTGTTTTAGAAGGTGTAAGGGCTAGACAAAAGCAGGATTCTTTTGTCATGGAGAAGCGATTGATGGAACAAGAGATGCAGCAATCAAATGTATCTCTGAATTTATACAATACAAAAGCTGCAAAAATTGAAGACCAGATGAGGTTTTGCTCAGATCAGATTCAAAAACTTGTGGACAATAAACTTCAAAGTTCTGTCGGTTTGGAAACTACACAAAGAAGGCTGTCGGATATTAGACCGTCATCGCAACAGGTTAGGGATACAGTGGTGGAAGTGCAATCTAAAATAGCCAGTAGTCGGGTGACTCATATGGAATTACAAGTAGAACTTGAGAAAGAAAGGTTTGCCAAAAAAAAAGTAGAGGAAGATCTAGAGGTTGCTAGGAGAAACTTTTCACATCTTAAATCACAAGATGAAGATTCCTCAGAAACTGATAAGCTTCAACAGGAACTGGGAGAATACAGGGATATTGTCAAGTGCAGTATCTGTCGTGACAGGACAAAAGAGGTGGTAATTACAAAATGCTACCACTTGTTCTGCAACTCATGTATCCAGAAAATTGCTGGTAGCCGGCAGCGCAAATGTCCACAATGTGGTGCATGCTTCGGGGCTAATGATGTTAAGCCGGTTTATTTGTAA 2634 0.391 MGSMGEHDRKRRFSSLSPTPATAKKLPFLPVSEDKKLDIAVLQYQNQKLTQKLETQKLEYAALENKFSQLKEKQQSYDSTLAVVKKSWEQLVNDLESCSEHIRESSRKVDSRFASSTDDGSSSTVQDVFLSRLLQTGATESSSSCHFANEMEQHREITAEKAKSILSNIVTSINNFQCLKDGFHTVLLKKLRGDVSCGQMLSNDLEVESKNLRLALSELHLKHKSLASDFRTHRDLDAKNKAELKRLKGELESTVAELEESNQKLATLKVEKDAAKGAVLPVLAVGNSLIPNDKIKDKQKDLQDMESTLKELLDQASTRAVELKNLHEERIRLLQQLCDLQNTLKNLKCITSSHAFQLVRDQIEKSKSEVQEYQALYEKLQAEKDSLTWREREWYIKNDLADLFQRSVEVSDLKVADIRTEIRKTIEQRDVIENKLKEEAREPGRKEIIAEFKSLLSSFPEEMGSMQSQLSKYKESASDIHSLRADVHSISSILDRKVKECDALSVRSAGQLAEINRLLAVVQDLRVTEDEMKLILRMFRHETIDSRDVMEAREAEYIAWAHVQTLKSSLDEHNLELRVKTANESEARSQQKLAAAEAEIADMRHNLDDSKRATCKQSDVMRSKNEENEAYLSEIETIGQAYDDMQTQNQHLLHQITERDDYNIKLVLEGVRARQKQDSFVMEKRLMEQEMQQSNVSLNLYNTKAAKIEDQMRFCSDQIQKLVDNKLQSSVGLETTQRRLSDIRPSSQQVRDTVVEVQSKIASSRVTHMELQVELEKERFAKKKVEEDLEVARRNFSHLKSQDEDSSETDKLQQELGEYRDIVKCSICRDRTKEVVITKCYHLFCNSCIQKIAGSRQRKCPQCGACFGANDVKPVYL 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01108 877 PANTHER RING FINGER PROTEIN-RELATED 1 877 IPR013956 GO:0004842|GO:0010390
Mepo3g01108 877 Coils Coil 39 80 - -
Mepo3g01108 877 Coils Coil 579 613 - -
Mepo3g01108 877 SUPERFAMILY RING/U-box 817 876 - -
Mepo3g01108 877 MobiDBLite consensus disorder prediction 1 27 - -
Mepo3g01108 877 Pfam Zinc finger, C3HC4 type (RING finger) 825 863 IPR018957 GO:0046872
Mepo3g01108 877 Coils Coil 295 315 - -
Mepo3g01108 877 ProSitePatterns Zinc finger RING-type signature. 840 849 IPR017907 -
Mepo3g01108 877 Coils Coil 705 725 - -
Mepo3g01108 877 Coils Coil 775 802 - -
Mepo3g01108 877 Coils Coil 422 442 - -
Mepo3g01108 877 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 805 877 IPR013083 -
Mepo3g01108 877 CDD RING-HC_Bre1-like 818 875 - -
Mepo3g01108 877 Coils Coil 356 390 - -
Mepo3g01108 877 SMART ring_2 825 863 IPR001841 -
Mepo3g01108 877 Coils Coil 241 278 - -
Mepo3g01108 877 ProSiteProfiles Zinc finger RING-type profile. 825 863 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01108 795 876 C3H Transcription Factor Family AT2G42030 31.325 1.14e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01108 K10696 - gmx:100790744 1325.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01108 3 17065807 17086368 Mepo3g01108 3 17065807 17086368 ECH