Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01103 ATGAAGCTGCTTCTTTCAATTTATATTTGTTCATTGACGATAGCCACCTCTCTTAAGGCTACTTCATCAAAAACTATACAAAGCAGGGAAGCAGCTGCTTTGTTGAAGTGGAAAGCAAGTCTTGACAACAAGAGCCAAGCTTTGTTATCTTCATGGAGTGGCAATAATTCATGCAACTGGCTTGGAATTTCTTGTAATGAAGATTCCATATCTGTTTCTAAGGTAAATCTCACAAATATGGGATTGAAAGGTACGCTTGAAAGTCTTAACTTCTCATCACTTCCAAATATCCAAACCCTAAACATAAGTCACAATTCCTTAAATGGAAGTATTCCTTCCCATATTGGAATGTTGTCCAAACTTGCTCATCTTGATCTTAGTTTCAATCTTCTCTCAGGAACAATTCCATATGAAATAACACAGTTGATTAGTCTTCAAACTTTATATTTGGATAATAATCTTTTTAGTGGTTCCGTTCCTGAAGAAATAGGTGAATTAAGAAATCTGAGAGAACTTAGTATCTCAAATGCAAGTCTCACAGGGACTATCCCAACTTCTATTGGGAACCTCACCTTGTTGTCACATTTGTATTTAGGAATAAACAACCTTTATGGCAGCATTCCAAAAGAACTTTGGAATTTGAACAACTTAACCTACTTAGCAGTTGATTTAAACGTATTTAATGGTTTTGTATCTGTCCAAGAAATTGTGAACTTGCATAAGCTAGAGACTCTTGATCTTGGTGAAAGTGGTCTTTCCATTAATGGTCCCATCCTCCAAGAACTTTGGAAGTTGGTAAATTTGTCATACCTTTCTCTTGATCAATGCAATGTCACAGGGGCTATTCCATTTTCTATAGGAAAGTTGGCCAACAAATTGACATATCTAAATTTAGTACACAACCAAATTTCTGGCCACATCCCTAAGGAAATTGGAAAGTTACAAAAGCTAGAATATCTATACCTTTCTCAAAATAACTTTTCTGGCAGTATTCCAGGGGAAATTGGGGGGTTGGTGAACATGAAAGATTTAAGGATTAATGACAATAATCTTTGTGGTTCGATTCCTCATGAAATTGGGGGATTGTTAAACATGAAAGAATTAAGGTTTAATAACAATAATCTTTCCGGTTCGATTCCTCGTGAAATTGGAATGATGAGAAATGTTGTTCTAATTGATTTGAACAATAACTCTCTCTCAGGTGAAATCCCTCGAACAGTTGAAAACTTGAGTGATTTACAATCTCTTACATTTGCTGAAAACCATCTTAGTGGCCACATCCCGATGGGAATTGGAAAGTTAAGGAAGCTAGAATATCTATATCTGTCTGACAATAACTTATCTGGTAGCATTCCTGTGCAAATTGGGGGGTTGGTGAACCTAAAAGAATTAAGGTTGAATGACAACAATCTTTCTGGTTCGATTCCTCGTGAAATTGGAATGATGAGAAATGTTGTTCTAATTGATTTGAACAATAACTCTCTCTCAGGTGAAATCCCTCGAACAGTTGAAAACTTGAGTGATTTACAATCTCTTACATTTGCTGAAAACCATCTTAGTGGCCACATCCCGATGGGAATTGGAAAGTTAAGGAAGCTAGAATATCTATATCTGTCTGACAATAACTTATCTGGTAGCATTCCTGTGCAAATTGGGGGGTTGGTGAACCTAAAAGATTTAAGGTTGAATGACAACAATCTTTCTGGTTCGATTCCTCGTGAAATTGGAATGATGAGAAATGTTGTTCAAATTGATCTGACCAATAACTCTCTCTCAGGTGAAATCCCACCAACAATTGGAAACTTGAGCGACATACTATATCTTTCATTTCCTAGAAACTATCTCACTGGGAAATTACCAACAGAAATGAACATGCTTGTCAACTTGGATCGCCTGCTAATCTATGATAATGACTTCATCGGTCAGCTGCCGCACAACATTTGCATTGGTGGGAATTTGAAATACTTGGCTGTTATGAATAACCACTTCACAGGCTCAGTTCCAAAGAGTTTGAAGAATTGCTCTAGCATTATTAGAATTAGACTTGAACAAAACCAACTTACTGGAAATATAACAGAGATCATAGATTTTGGAGTATATCCAAATTTGGTTTACATGCAATTAAGTCAAAACAATTTTTATGGACACCTTTCATCCAATTGGGGAAAGTTCCATAACCTGACAACCTTCAATATTTCCAATAATAATATATCAGGCCATATACCACCAGAGATAGGAAAGGCACCCATCTTGGGTTCACTTGACTTATCTTCAAACCATCTCACAGGGAAAATTCCAAAGGAGTTAAGCAACTTATCTTTGTTGAACCTCTTGATAAGCAACAACCATCTCTCCGGAAACATTCCTGTAGAAATATCATCCTTAGAGCTTGAGACCTTAGACCTTGCAGAAAATGATCTCCGTGGCTTCATCAGAAAAGAACTTGCAAATTTGCCTAAGGTATGGAACTTAAATTTGAGCCATAACAAATTCACAGGAAATATTCCTATTGAATTTGGACAATTTGATGTCCTTCAAATCCTAGATCTCAGTGGAAATTTTTTGAATGGAACAATACCAACAATGCTTGCACAGTTGAAATACTTGGAAACATTGAATATCTCACATAATAATCTATCTGGTTTTATTCCCTCTAGCTTTGATCATATGTTTAGCTTGACGTCTGTTGATATATCATATAACCAATTGGAGGGTCCACTCCCCAATATTCGAGCTTTCAGCAACGCTACAATTGAAGTGTTGAGAAATAATAAAGGCTTGTGCGGTAATGTCTCTGGCTTAGATCCCTGCCCAACATCAAGCATTGAATCTCATCATCATCATCATACTAACAAAATCTTATTGATAGTTTTACCCTTTATAGCTGTTGGAACTCTAATTATAGCCTTATTTTGCTTCAAATTCTCACATCATCTCTTCCAAAGATCAACCACCAATGAAAACCAGGTTGGAGGGAACATCAGTGTACCACAAAATGTATTTACAATATGGAACTTTGATGGGAAAATTTTGTATGAGAACATTTTGGAAGCCACAGACGAGTTTGATGAAAAACATCTCATTGGAGTTGGAGGGCATGGAAGTGTCTACAAAGCAAAGTTTCACACAGGTCAAGTAGTTGCTGTGAAGAAGCTCCATTCAATAGCAAATGGAGAAAATCCAAATCTAAAATCATTCACAAATGAGATTCAAGCTCTGACCGAAATTCGACATCGTAATATTGTGAAGTTGTATGGATTTTGCTCGCATTCGCAGTTGTCATTTTTGGTTTATGAGTTCGTAGAGAAAGGTAGTTTGGAAAAGATTTTGAAAGATGATGAAGAAGCCATTTCATTTGATTGGAATAAGAGGGTGGATGTCATTAAAGATGTAGCCAATGCTTTATGCTACATGCATCATGATTGCTCACCTCCAATTGTTCATCGAGATATATCAAGCAAGAATATTCTTCTGGATTCAGAATGTGTGGCTCATGTCTCTGACTTTGGAACAGCTAAGCTTCTTGATCTTAATTTAACGAGCTCAACCTCGTTTGCATGCACATTTGGATATGCTGCTCCAGAACTTGCATACACCACAAAAGTGAATGAGAAGTGTGATGTGTACAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAACATCCTGGAGAGGTTATATCCTTATTTAACACCACTGACTCTATACCTGATATTAAGCTAGTAATAGATATGTTGGACCAACGTCTCCCTCATCCTTTGAATCCCATTGTCGAGGAGTTAGTATCGATTGCAATGATAGCTTTTGCATGTTTGACTGAAAGTCCTCAATCTCGTCCTACCATGGAGAAGGTGTCAAGGAGCTTGTAA 3873 0.3679 MKLLLSIYICSLTIATSLKATSSKTIQSREAAALLKWKASLDNKSQALLSSWSGNNSCNWLGISCNEDSISVSKVNLTNMGLKGTLESLNFSSLPNIQTLNISHNSLNGSIPSHIGMLSKLAHLDLSFNLLSGTIPYEITQLISLQTLYLDNNLFSGSVPEEIGELRNLRELSISNASLTGTIPTSIGNLTLLSHLYLGINNLYGSIPKELWNLNNLTYLAVDLNVFNGFVSVQEIVNLHKLETLDLGESGLSINGPILQELWKLVNLSYLSLDQCNVTGAIPFSIGKLANKLTYLNLVHNQISGHIPKEIGKLQKLEYLYLSQNNFSGSIPGEIGGLVNMKDLRINDNNLCGSIPHEIGGLLNMKELRFNNNNLSGSIPREIGMMRNVVLIDLNNNSLSGEIPRTVENLSDLQSLTFAENHLSGHIPMGIGKLRKLEYLYLSDNNLSGSIPVQIGGLVNLKELRLNDNNLSGSIPREIGMMRNVVLIDLNNNSLSGEIPRTVENLSDLQSLTFAENHLSGHIPMGIGKLRKLEYLYLSDNNLSGSIPVQIGGLVNLKDLRLNDNNLSGSIPREIGMMRNVVQIDLTNNSLSGEIPPTIGNLSDILYLSFPRNYLTGKLPTEMNMLVNLDRLLIYDNDFIGQLPHNICIGGNLKYLAVMNNHFTGSVPKSLKNCSSIIRIRLEQNQLTGNITEIIDFGVYPNLVYMQLSQNNFYGHLSSNWGKFHNLTTFNISNNNISGHIPPEIGKAPILGSLDLSSNHLTGKIPKELSNLSLLNLLISNNHLSGNIPVEISSLELETLDLAENDLRGFIRKELANLPKVWNLNLSHNKFTGNIPIEFGQFDVLQILDLSGNFLNGTIPTMLAQLKYLETLNISHNNLSGFIPSSFDHMFSLTSVDISYNQLEGPLPNIRAFSNATIEVLRNNKGLCGNVSGLDPCPTSSIESHHHHHTNKILLIVLPFIAVGTLIIALFCFKFSHHLFQRSTTNENQVGGNISVPQNVFTIWNFDGKILYENILEATDEFDEKHLIGVGGHGSVYKAKFHTGQVVAVKKLHSIANGENPNLKSFTNEIQALTEIRHRNIVKLYGFCSHSQLSFLVYEFVEKGSLEKILKDDEEAISFDWNKRVDVIKDVANALCYMHHDCSPPIVHRDISSKNILLDSECVAHVSDFGTAKLLDLNLTSSTSFACTFGYAAPELAYTTKVNEKCDVYSFGVLALEILFGKHPGEVISLFNTTDSIPDIKLVIDMLDQRLPHPLNPIVEELVSIAMIAFACLTESPQSRPTMEKVSRSL 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01103 1290 ProSiteProfiles Protein kinase domain profile. 1022 1290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01103 1290 FunFam Leucine-rich receptor-like protein kinase family protein 525 621 - -
Mepo3g01103 1290 Gene3D Transferase(Phosphotransferase) domain 1 1101 1290 - -
Mepo3g01103 1290 Pfam Protein kinase domain 1023 1287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01103 1290 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1146 1158 IPR008266 GO:0004672|GO:0006468
Mepo3g01103 1290 FunFam Uncharacterized protein 648 946 - -
Mepo3g01103 1290 SUPERFAMILY RNI-like 271 640 - -
Mepo3g01103 1290 SMART LRR_typ_2 434 457 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 554 578 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 866 889 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 94 118 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 142 166 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 724 748 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 458 482 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 314 338 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 362 386 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 530 553 IPR003591 -
Mepo3g01103 1290 SMART LRR_typ_2 190 214 IPR003591 -
Mepo3g01103 1290 SUPERFAMILY RNI-like 608 911 - -
Mepo3g01103 1290 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Mepo3g01103 1290 FunFam MDIS1-interacting receptor like kinase 2 1101 1290 - -
Mepo3g01103 1290 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 555 1290 - -
Mepo3g01103 1290 FunFam Leucine-rich repeat receptor protein kinase MSP1 985 1100 - -
Mepo3g01103 1290 ProSitePatterns Protein kinases ATP-binding region signature. 1028 1051 IPR017441 GO:0005524
Mepo3g01103 1290 Gene3D Phosphorylase Kinase; domain 1 987 1100 - -
Mepo3g01103 1290 SUPERFAMILY RNI-like 75 376 - -
Mepo3g01103 1290 Gene3D Ribonuclease Inhibitor 18 90 IPR032675 -
Mepo3g01103 1290 Gene3D Ribonuclease Inhibitor 612 940 IPR032675 -
Mepo3g01103 1290 Gene3D Ribonuclease Inhibitor 482 550 IPR032675 -
Mepo3g01103 1290 Gene3D Ribonuclease Inhibitor 551 604 IPR032675 -
Mepo3g01103 1290 Gene3D Ribonuclease Inhibitor 91 232 IPR032675 -
Mepo3g01103 1290 Gene3D Ribonuclease Inhibitor 233 478 IPR032675 -
Mepo3g01103 1290 FunFam Nuclear pore complex protein NUP107 27 184 - -
Mepo3g01103 1290 FunFam Leucine-rich receptor-like protein kinase family protein 430 524 - -
Mepo3g01103 1290 SMART LRR_sd22_2 386 412 - -
Mepo3g01103 1290 SMART LRR_sd22_2 118 147 - -
Mepo3g01103 1290 SMART LRR_sd22_2 434 460 - -
Mepo3g01103 1290 SMART LRR_sd22_2 482 508 - -
Mepo3g01103 1290 SMART LRR_sd22_2 314 329 - -
Mepo3g01103 1290 SMART LRR_sd22_2 530 556 - -
Mepo3g01103 1290 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515
Mepo3g01103 1290 Pfam Leucine rich repeat 845 903 IPR001611 GO:0005515
Mepo3g01103 1290 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Mepo3g01103 1290 FunFam Receptor-like protein kinase 7 191 429 - -
Mepo3g01103 1290 SUPERFAMILY Protein kinase-like (PK-like) 1007 1288 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01103 Mepo-Chr3 16919531 16923559 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01103 265 836 Receptor kinase-like Gene Family AT4G08850 34.146 1.73e-81 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g01103 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01103 - - tpra:123910542 1217.22