Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01083 ATGGAGTTCCTTCAAGATGATAATTTTAGTTCTCCCAGTCTTGTGCCTACAGACATCTTGAACGAGCTTCGTCAAAGTTATAAGAAGATTATGGTTCTTTATACAACTCCAGACAATGGAGGAAAAGCTAAGAAAACTAAATGGGTTATGCATCAATACCATCTTGGAACAAAAGAGGATGAAAGGGAAGGGGAGTATGTTACATCCAAAGTATTTTACCAACAACAACAAGCTAAATTGGGTGACAAATATGACTAG 258 0.3682 MEFLQDDNFSSPSLVPTDILNELRQSYKKIMVLYTTPDNGGKAKKTKWVMHQYHLGTKEDEREGEYVTSKVFYQQQQAKLGDKYD 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01083 85 Gene3D NAC domain 14 79 IPR036093 GO:0003677|GO:0006355
Mepo3g01083 85 SUPERFAMILY NAC domain 21 74 IPR036093 GO:0003677|GO:0006355
Mepo3g01083 85 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 24 80 IPR044799 GO:0003700
Mepo3g01083 85 ProSiteProfiles NAC domain profile. 1 74 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01083 Mepo-Chr3 16546333 16546590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01083 25 81 NAC Transcription Factor Family AT4G28500 61.404 3.74e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01083 - - mtr:11406966 103.99