Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01074 ATGAGTCAGTGTGTTCCTAGTTGGGATGTTGACGAAAATCCTCAACCACCTCCAAGATCAGTCTCTCTTCGTTCCAACTCTAATTCAACTAACCCCCATGATGTTCCCATGTTAGACTATGATGTAGCAGAATTGACATGGGAAAATGGACAAATTTCTATGCATGGCTTAGGGTTACCGAAAGTGCCGCATAAACATGCATCAGCCGCAGGTACAACACCTTCCAAGGAAACATGGGAAAAGCCTCGTGGTAGTGGCACCTTGGAGTCTATAGTGAACCAAGCCACTAGCTTTCCACACCGCGGAAAATCACCCTTTCTCGCCGGTGGTGGTGTTTATGGCAACATGTTAGTCCCATGGCTTGACCCACAACGTGCGGCAGCCATCGCAGCTGCGACAGCCGCCAACAACGGCATGGCTGTGGACGCGTTGGTTCCCTGCTCCAATACTACTAAGGAGCAGAGAACCCATGCAATGGATCCAGTCCCTAGATCAGGGATTGGGTCATGCATGGTTGGCGGCCATACACCTGTGGGATCCTGCAGTGCTGTCGTGGCCGCAACGCAGGACGAAGGAGGTATCCTTGCTGCGTCAGCAGCGAAGCGTGAGAGAGTGGCACACGTGGCGGGGAGCGGTAGGGACCAAAGTATGAGTGGCAGTGCAACCTTTGGGAGGCAGAGCCAGCAAGTGACACTAGATAATACGTACGATAGGGAATTTGGTATGACTGGTTTCACTTCAACTTCAATAGCTTCTATGGATAACACCAGCTCTGAGAAGCAGTGCACCAGGACCACCACCGTAGACGACCATGATTCTGTTTGTCACAGTAGACCACCGAGGGAGGAAGCTGACGTGGATGAGAAAAAGAGAGAAAATAGAAAATCATCAGTTTCCACTAAAAGGAGTAGAGCTGCAGCTATACACAACCAATCTGAAAGGAAAAGGAGGGATAAGATAAACCAGAGAATGAAGACATTACAAAAGTTGGTCCCAAATTCCAGCAAGACCGATAAAGCTTCAATGTTAGATGAGGTGATAGAATATCTGAAACAATTGCAAGCACAAGTGAACATGGTAAATAGATTCAACATGTCATCCATGATGATGCCGATGACAATGCAACAACAACTTCAAATGTCGATGATGAATCCAATGGGCATGGGAATGGGGCCGATGGGAATGGCCGGGATGGGCATGGGTATGGGAATGGGGATGGGGATGGATATGAACACCATGAATCGCGCTAACATCCCTGGAATGCCTCCCGTCCTCCACCCTTCTGCATTCATGCCCATGCCTTCGTGGGATGCCGGTGGTGGTGACCGACTTCAAGGGCCTCCAGCAGCTGGGATGGCTGACCCCCTCTCCACATTTTTTGGTTGCCAATCACAGCCTATGACCATGGATGCTTATAGTAGGATTGCTGCCATGTATCAGCAAATGCAACAACAACCTCCAGCACCAGGTTCAAATAATTGA 1482 0.4939 MSQCVPSWDVDENPQPPPRSVSLRSNSNSTNPHDVPMLDYDVAELTWENGQISMHGLGLPKVPHKHASAAGTTPSKETWEKPRGSGTLESIVNQATSFPHRGKSPFLAGGGVYGNMLVPWLDPQRAAAIAAATAANNGMAVDALVPCSNTTKEQRTHAMDPVPRSGIGSCMVGGHTPVGSCSAVVAATQDEGGILAASAAKRERVAHVAGSGRDQSMSGSATFGRQSQQVTLDNTYDREFGMTGFTSTSIASMDNTSSEKQCTRTTTVDDHDSVCHSRPPREEADVDEKKRENRKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVNMVNRFNMSSMMMPMTMQQQLQMSMMNPMGMGMGPMGMAGMGMGMGMGMGMDMNTMNRANIPGMPPVLHPSAFMPMPSWDAGGGDRLQGPPAAGMADPLSTFFGCQSQPMTMDAYSRIAAMYQQMQQQPPAPGSNN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01074 493 MobiDBLite consensus disorder prediction 248 263 - -
Mepo3g01074 493 Coils Coil 310 330 - -
Mepo3g01074 493 Pfam Helix-loop-helix DNA-binding domain 309 354 IPR011598 GO:0046983
Mepo3g01074 493 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 42 489 IPR031066 -
Mepo3g01074 493 MobiDBLite consensus disorder prediction 264 299 - -
Mepo3g01074 493 FunFam transcription factor UNE10 isoform X1 299 364 - -
Mepo3g01074 493 CDD bHLH_AtPIF_like 304 359 IPR047265 -
Mepo3g01074 493 MobiDBLite consensus disorder prediction 248 318 - -
Mepo3g01074 493 MobiDBLite consensus disorder prediction 209 228 - -
Mepo3g01074 493 MobiDBLite consensus disorder prediction 18 34 - -
Mepo3g01074 493 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 304 353 IPR011598 GO:0046983
Mepo3g01074 493 MobiDBLite consensus disorder prediction 1 36 - -
Mepo3g01074 493 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 302 367 IPR036638 GO:0046983
Mepo3g01074 493 SMART finulus 310 359 IPR011598 GO:0046983
Mepo3g01074 493 MobiDBLite consensus disorder prediction 213 228 - -
Mepo3g01074 493 Gene3D - 299 364 IPR036638 GO:0046983
Mepo3g01074 493 MobiDBLite consensus disorder prediction 58 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01074 Mepo-Chr3 16202569 16209464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01074 1 473 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 44.421 5.11e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g01074 HLH 7.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01074 - - gmx:100798775 556.984