Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01032 ATGGGAAGACAACCATGTTGTGATAAGGTTGGTTTGAAGAGAGGACCATGGACCATTGAAGAAGATCACAAGCTTGTGAATTTTATCCTTAATAATGGGATTCATTGTTGGAGAATGGTTCCTAAACTTGCAGGTCTTCTAAGATGTGGAAAGAGTTGTAGATTGAGATGGATTAATTATTTGAGGCCAGACCTTAAGAGAGGTGGCTTTACTGAAATGGAAGAGGATCAAATTATACAACTACATGCCCGTCTTGGTAACAGGTGGTCAAAGATTGCTTCACATTTTCCCGGAAGAACAGACAATGAAATTAAGAATCATTGGAACACAAAAATCAAGAAGAAGCTGAAGTTCCTTGGTTTAGACCCAGTGAACCATAAGCCAATTGAGCAAAAGCAACAAACCCTTGATGATGATAAAAATATTATTAACCAAGAACCAACTATTTCAGGAGGGTTTGAAGAAAATGTGGAGATGAAATTCTTGGAAAGTGATGGCACAAAAGAAATGACAAAAACGGAATGGAAAAGAGAAGAAAACAAGGTGGCTTGGGATGATACTTCTGAACTCTTGAACAATTTTGAAATGCTATGTTCAAATTTGGACTTGGAGACATGGATGAGCCAAGACACCAACACTAGTGCTAATTCAGTTTCTAGTTCTTCAGTCTCTCTTGATAATACTAGCCACATTTCCATTGATGAATCCTCCTACTTTCAACAAAATTCGTTACAACAATGGGTTGATAGTATGGATTCCATTATCCCATGGGATGGCTTCAATCTTCTTGACCAAGATATTTCTTTTTTTGGAAAATAA 819 0.3712 MGRQPCCDKVGLKRGPWTIEEDHKLVNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHARLGNRWSKIASHFPGRTDNEIKNHWNTKIKKKLKFLGLDPVNHKPIEQKQQTLDDDKNIINQEPTISGGFEENVEMKFLESDGTKEMTKTEWKREENKVAWDDTSELLNNFEMLCSNLDLETWMSQDTNTSANSVSSSSVSLDNTSHISIDESSYFQQNSLQQWVDSMDSIIPWDGFNLLDQDISFFGK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01032 272 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 224 - -
Mepo3g01032 272 FunFam MYB transcription factor 11 67 - -
Mepo3g01032 272 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo3g01032 272 CDD SANT 16 61 IPR001005 -
Mepo3g01032 272 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo3g01032 272 Gene3D - 11 67 - -
Mepo3g01032 272 Gene3D - 69 144 - -
Mepo3g01032 272 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo3g01032 272 FunFam MYB transcription factor 68 129 - -
Mepo3g01032 272 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Mepo3g01032 272 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo3g01032 272 CDD SANT 70 110 IPR001005 -
Mepo3g01032 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo3g01032 272 SMART sant 13 63 IPR001005 -
Mepo3g01032 272 SMART sant 66 114 IPR001005 -
Mepo3g01032 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01032 Mepo-Chr3 14955559 14957023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01032 1 135 MYB Transcription Factor Family AT5G16600 75.556 6.64e-76 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g01032 Myb_DNA-binding 2.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01032 K09422 - gmx:100783231 447.588