Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01022 ATGCAACGAGGGTTACTGCAGTGGATTCGTCGTCGCCGTCTCATAAAAAATCACATTAGGTCTGAGGTTTTGGTTTCAGACGACGTCGCCGTCGCCGCCACTTTCTCGATTCACTGTGGTGGTGCTGCGAGGGAGCCGAGAAAAGCCACCATAGATGCTGGTGCGATTGCTGGCCTTAATGTCATTCGGATAGTCAATGGACCTACTGCTGCAGCTATTGCATATGGTCTTGACAAGAGAAGTGACTGTGATGGTAAACAAATTCTTGTCTTTGATCTTGGTGGTGGTACTTTGGATGTGTCTATCATCACAATTAATGGTGACGACTTTGAAGTAAAAGCCACTTCCGGAAACACCCACCTTGGGGGAGAAGACTTTGATACAAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAAGGACAATAAAGTAGACATTAGCACGAACGCAATATCATTAAGGAGGTTGAGAGATGCATGTGAAAGGGCAAAGAGGACACTCTCCGAGGAATCTGTCGCCATTGTTGAGGTAGAGTTCTTATTCAAGGATATAGACTTTATTTCACCAATCACTCGTACCGAGTTTGAGGAAATTAATATGGACCTTGTCGATGAGTGTATCAAAACGGTTGAAAGTTGTCTCAGTGATTCAAAGATATGCAAGAGTGATATCGATGATATTGTCATTGTGGGCGGCTCGTCTAAGATTCCTAAAGTGCAAGAACTGTTGCGAAATTTTTTCGAGGGGAAAGATTTGTGCAAGAGTATCAACCCGGATGAGGCTGTTGCTCATGGTGCTGCTGTCCAGGCTGCTATTTTGAGTGAAGGCTTTAAGAATGTCCCGGACTTGATGCTGCGAGATGTTACCCCATTTTCACTTGGTATCTTAGCAGAGGATGGTCGTGTCATGAGTGTGGTGATTCCTAGGAACATTTTCATACCTGTCAAGAAGACAAAGTGA 960 0.4427 MQRGLLQWIRRRRLIKNHIRSEVLVSDDVAVAATFSIHCGGAAREPRKATIDAGAIAGLNVIRIVNGPTAAAIAYGLDKRSDCDGKQILVFDLGGGTLDVSIITINGDDFEVKATSGNTHLGGEDFDTRMVNYFVEEFKKDNKVDISTNAISLRRLRDACERAKRTLSEESVAIVEVEFLFKDIDFISPITRTEFEEINMDLVDECIKTVESCLSDSKICKSDIDDIVIVGGSSKIPKVQELLRNFFEGKDLCKSINPDEAVAHGAAVQAAILSEGFKNVPDLMLRDVTPFSLGILAEDGRVMSVVIPRNIFIPVKKTK 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01022 319 Gene3D - 80 256 - -
Mepo3g01022 319 FunFam Heat shock 70 kDa 122 205 - -
Mepo3g01022 319 SUPERFAMILY Actin-like ATPase domain 85 273 IPR043129 -
Mepo3g01022 319 Coils Coil 153 173 - -
Mepo3g01022 319 ProSitePatterns Heat shock hsp70 proteins family signature 2. 90 103 IPR018181 -
Mepo3g01022 319 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 272 319 IPR029047 -
Mepo3g01022 319 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 279 318 IPR029047 -
Mepo3g01022 319 ProSitePatterns Heat shock hsp70 proteins family signature 3. 227 241 IPR018181 -
Mepo3g01022 319 PRINTS 70kDa heat shock protein signature 256 276 - -
Mepo3g01022 319 PRINTS 70kDa heat shock protein signature 96 106 - -
Mepo3g01022 319 PRINTS 70kDa heat shock protein signature 282 301 - -
Mepo3g01022 319 PRINTS 70kDa heat shock protein signature 224 240 - -
Mepo3g01022 319 SUPERFAMILY Actin-like ATPase domain 46 79 IPR043129 -
Mepo3g01022 319 Gene3D Actin; Chain A, domain 4 122 205 - -
Mepo3g01022 319 PANTHER HEAT SHOCK PROTEIN 70KDA 45 317 IPR013126 GO:0005524|GO:0140662
Mepo3g01022 319 Pfam Hsp70 protein 46 318 IPR013126 GO:0005524|GO:0140662
Mepo3g01022 319 Gene3D - 46 271 - -
Mepo3g01022 319 FunFam heat shock 70 kDa protein-like 21 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01022 Mepo-Chr3 14755710 14761393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01022 47 319 Calmodulin-binding Proteins AT1G56410 65.455 6.04e-118 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01022 K03283 - gmx:102667578 356.295