Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00986 ATGAAATCAGATCTTAGTTTTTCAGAAAAAATTTCTTATCTCTTAGGAGATTTTCCTACAATTCCTCCAGAAAAATCAGAGATTCCCACAATGGTTTTCTTGGAACCGGAACCAAGTTCAACTATTTCAGCTACACCATCACATTACACCAGTTTTTTGTACAATCAAAGTAGTCAATCTAATGAACATCCTCTGAACATGGCTAGGGTTTCTACCGTAGTTCCTTCGTCTATCAACCCATTTTCTATGATCCCATCCCCTTCATACAAGGATGCAAACAACAATAGATCCCAAAGCAATTTTTTCAACGACCAAATTCCAATGACCTTTACACCAAACAATAACAAAATGGAATTTATGCATGAACGCCTTAATACTGGCAAAGGAATTTGGGATTTCTCCCAACAAAATCTTTTTCAATACAATGAAACTTCACAATCTCAGGTCACTCCCTCTCTATCAACATCAGTAGTTTACGAACGCCTTAATATAGACAAAGGAATTTGGGATTTCTCCCAACAAAATATCTTTCCATATGGCGAAACTTCACAATCTCAGGTCAGTCCCTCTCTATCAACATCAGTAGTATATGATGAAAACCCATCTTTGTTAGTTAAGCCTAGGCTTCAAGCCAATCTTTCTTGCGTTGTTGGATTTGTAAACAAACCCCAACACAATGATGAAGGACTCATCCCCAGCGAACAAAAGCGGCAAAAGAGGGTTGATAAGACTATTGAAATTCAACAAAGGGATTTCAATACAATCAAAAGGCTATGGACTTCAGATGAGGATAGGATTCTTGTCCAATTGGTGGAAAAATTTGGGCTTAATAACTGGGTAGAGATTGCTAAGTCTATGAATGGAAGAATCGGAAAACAGTGCAGGGAGAGATGGTTCAACCATCTTCAACCGGACATTAAGAAGGAGTCATGGAGCGAAGAGGAAGACATATTATTGATCGAAGCTCACAAGAATGTTGGAAACAAGTGGGCTGAAATTGCAAGTAGACTGCCTGGACGCACCGAGAACTCCATCAAGAACCGCTGGAACTCCACTAAGCGCAGCCTGAATGCTACAAATAGGCCGAACCGGCGAAATAGTTTGAGAGGAACATTACTTCATAACTACGTCAGTGAAATCACTAATGCGAAGAATGTTCAAAAAGAGATGACTAATTCCATGAACATAGTGCAGATTGCGAATCAGACAAATTTCAACATTACCGATACCAACCCTGGTCCTAGTCATGTTCGGTATGAAATTTCCGACAATGGTTTTACATCTGAAGGTTTGGCTACTCCTGTGGAAGAAGATGGTGGCTATGCGGCAATGATGCTCAATGGTGATGATGGAATGACAAATGGGTATGACACAATGAATTATGGGTTCGGATCGTATGGAATGGAGTTTTTTCCTGAGTTTTTACCTCATGGAGATAATATATAG 1446 0.3949 MKSDLSFSEKISYLLGDFPTIPPEKSEIPTMVFLEPEPSSTISATPSHYTSFLYNQSSQSNEHPLNMARVSTVVPSSINPFSMIPSPSYKDANNNRSQSNFFNDQIPMTFTPNNNKMEFMHERLNTGKGIWDFSQQNLFQYNETSQSQVTPSLSTSVVYERLNIDKGIWDFSQQNIFPYGETSQSQVSPSLSTSVVYDENPSLLVKPRLQANLSCVVGFVNKPQHNDEGLIPSEQKRQKRVDKTIEIQQRDFNTIKRLWTSDEDRILVQLVEKFGLNNWVEIAKSMNGRIGKQCRERWFNHLQPDIKKESWSEEEDILLIEAHKNVGNKWAEIASRLPGRTENSIKNRWNSTKRSLNATNRPNRRNSLRGTLLHNYVSEITNAKNVQKEMTNSMNIVQIANQTNFNITDTNPGPSHVRYEISDNGFTSEGLATPVEEDGGYAAMMLNGDDGMTNGYDTMNYGFGSYGMEFFPEFLPHGDNI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00986 481 Gene3D - 310 353 - -
Mepo3g00986 481 Gene3D - 255 307 - -
Mepo3g00986 481 ProSiteProfiles Myb-like domain profile. 259 302 IPR001005 -
Mepo3g00986 481 PANTHER MYB PROTEIN-RELATED 258 382 - -
Mepo3g00986 481 SMART sant 255 304 IPR001005 -
Mepo3g00986 481 SMART sant 307 355 IPR001005 -
Mepo3g00986 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 251 306 IPR017930 -
Mepo3g00986 481 CDD SANT 259 302 IPR001005 -
Mepo3g00986 481 CDD SANT 310 353 IPR001005 -
Mepo3g00986 481 FunFam Transcriptional activator Myb isoform A 255 308 - -
Mepo3g00986 481 Pfam Myb-like DNA-binding domain 259 319 - -
Mepo3g00986 481 SUPERFAMILY Homeodomain-like 253 349 IPR009057 -
Mepo3g00986 481 ProSiteProfiles Myb-like domain profile. 303 353 IPR001005 -
Mepo3g00986 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 307 357 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00986 Mepo-Chr3 14194192 14196960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00986 255 380 MYB Transcription Factor Family AT4G18770 62.698 1.04e-49 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g00986 Myb_DNA-bind_6 4.5e-18 CL0123