Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00965 ATGAAGTCACGACACGACCCAAATTGTGAACGCGGGAAAATCAAGCATCAAAATTTGGTCACTTCTCATCACAAATCAAAATCAGAACTGAAACAAGAAGAAGAAGAAGTAGAAACACAAAACCCTAAAATGCCTCCGAAGAAGAAACCTAACAATTCATCATCATCATCATCTTCTTCAAAGAAACCCATTCCACAACCATCCAAATACGGTATTCAACACTTCTTCGATCGCCACACAACTCAACATCAAAACTCTCAGAAACTTCAATCCAACCATGTTGCTGACGCTGCTTCCGATCCGCCGGAAAAATCTAATGATGCCGAGGCGAAGGCGTCGGGTGCTTCTTCACAGGCTAGTACGCCTGTTAATGAGGCTCATACGTTATCTGAGGTGTCTCCAGAGATGTCGAAGACTACGTCTCGAAAACGGTTCAAATTCTCGCCTGGGATGTTCATCAAGCAGAGTCAGGATGATGGGGCCGATGAGGTGACATGGAAGATATCTCCAGTGAATGAAAGGCTTCAAGCAGTTTCAAAACGCATGCCTAAGATAATTCAAGCATTGGCTGATTCTTCGAGGGCCAACATGTTGCAAATTCGCCGCTGCTCAGAAGATAAGACTTCTCTGGACAAAGGTGATAAGGCCGAAGAGTTGCTTATTACATCAACTCCCAATGCATCTACAAAAGCTCCGTTGTCATTGAGTAAATTAGGCCTGAAAAAATTGAACCCTGACCGAGGTGTGGACTGTAATGGCAATCCAACTACTCTGAGCAATTCTTCAGTGGCTGGTGGAAGAAATCCCTTCAGAACTCCACCATCCTTGTCTTGTCGCGAGCTTGCCAAGGATATTGAGCACAACGGACCATCTGACCAGCCTTTTTTGAGACAGCACAAAAAGGCATTGCTTGAACTTTTAGATCAAGTCGAAGATGCAATTGGTGTTGATAATGACACAGTTTGTGATAAAACCACTCATTCCGGTAATTCACAAGATGGAATTGCTGACGGGCTCCCTGTCAGAGCCAACGATCTAGTTGAAAGGACTAAATCACATATACCTAAAGAGGTTGTCGGTGTTTTCTCCGATTCTAGTTATTTGGTTTTGGAGGTATCTGAAAAATCGCAACCTGCTGCTCAAGGCCCATACAAGGTGCTTCGTTTACTAAATGAACAAAGTGGAGAAGAGCGAGCTGTACACTTGTGGGATGAATGCTCTGATACTAGTTGGTTTGGTTTGGTTTTCTCTTTTGACGGGTCTTACAGTGTAGTTGCACCTGGAGATACTGTGAACATAATTGGTGAATTTGACGAATGGGGCAATTGTGATATTAATCATGATAATAATTTTTTGATTGTACACCCGGATATTCTTGTGTCTGGAACACGGGTCGCTTCCAGTTTTAGTTGCCCAAGGAGAACTGTCTTAGATGAAAGGCTAAAATGCAATGAATACTCAACTGCAGCTTTATGTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGGCTTACAAATGACAATCCTACAATAGACTTCTTGGAGTCTTACACAGAAGTGGTTTTACAAAGAAATGTTGAAAGTTTATTTGCATGTGGAGTAAATGAAAAGGATGTTCACAAAACCATGATTGATGCTGTCCCTAGAATATACAATTGGATCATGCTGTTCAGAAATATGGAGGTAATTGATATTGAAGAAATGGCATGGGCACCAAAATATGGTTTAAAGGGGATGATCGATGCTTCGGTTAGAGTGAAGGTTCATTCTAGAAAAGATCGACCAGAGGAGAAGATCATGCCAGTAGAGTTCAAAACTGGAAAATCACCTAGTGGCCAGGCAAGATTCTGGTACCAGAAAACCATTGATTCTGGTCTTCTGTATTATCTCCAAACAGATCAGACACAGGGAATTACGGTTCAAAGATCTGACTTAGTTGGGTTAATAATACGGCGTAATGAGCTTGCAAGCGAGATTCTCAAGGCATTAGTCTTGCAACAACTTCCACCAGTGTTACAGGCACATGGTGGAAGCGTCGAGAATAATGGATCGGGAGATATTTTCGATTCCAATACTAATCACTTGAGATCATCTCATTCTAAGTTCCTCTGCCATTGGGATCATTTGATTGACTTAGAAGCGAAAGGGACTGAGTTCATAAAGAAAGACGTGTGGCGTTCATATAATATGAGGAGTCGCAGCGCTGGTGGTGTTTCTTCTATTGTTATTGATGCTTCACAAGGAATACCTTATTCAACATCTCACGAAGATAATTGTTTCATTTATCGTTTTGTACCACAAGATAATTCTTATCCCTCAATAGTTTCTGATGATGATCCTTCTAGTGCCTCTTTGAAAAATGATTTGGATCTCACACTGAGAAGTGGTGACTATGTGATATTGAGTAATGAATCAAGCCATCAAACTATTGCAAAAGGGGTGATTTCAGATATTAGTCACAATCATATATCTGTTTCCTTTTCCAAGCTCTTGAGAATTCCTGGGAGGTCTTCCACGGAACATGATCTCCTTCAGCAGGTTTGGAGAATCGACAAGGATGAAGCTGTGACTTCATTTGCAATTATGAGGTTTAATCTTGTACAACTTTTTCTACAAGATGATCAAAGTGGTCATCTCCGGAGGATGATTGTTGACCTTGAGGCTCCTAGATTTGACAGTAGCTCTATAGTTAGCCAGGATCCAGCAATATCTTACGTTTGGTCTGAGCAGAGTTTGAATGATGATCAACGTAGAGCAATTCTCAAGATACTTGTGGCAAAAGATTATGCACTTATATTAGGAATGCCTGGAACGGGAAAGACATCCACCATGGTCCATGCTGTGAAAGCCTTATTGATTAGAGGGACATCCATTTTACTAACAGCCTATACAAATTCCGCTGTTGATAATTTACTAATCAAATTAAAAGCACAGGGCATTGATTTTGTACGTGTTGGAAGACAAGAAGCAGTGCATGAAGAGGTTAGAGGGCACTGCCTCTCAGAAACAAACGTAAAGAGTGTTGAAGATATCAAAATAAGGTTAGAACAAGTCAAAGTTGTTGCAGTTACTTGTTTGGGCATTTCCAGTCCCCTGCTTGCCAACAAGAGATTTGATGTATGCATTATGGATGAAGCCGGGCAGACCACTTTGCCGGTGTCCTTGGGCCCTCTAAGATTTGCTTCAACGTTTGTTCTTGTGGGGGATCATTATCAACTGCCACCACTTGTCCATAGTACAGAGGCCCGAGAGAATGGCATGGGGATGAGTTTATTTTGTAGGCTTTCAGAAGCTCATCCACAGGCAATTTCAGCTTTACAGAGTCAGTACCGTATGTGTCAGGGTATTATGGACCTGTCAAATGCCTTGATATATGGCGACAGACTGAGGTGTGGTACATCTGAGATAGCTAATGCCGAACTTGAGTTTTCTGGCTTAAACTGCTGTTTGCCTTGGCTAGAAGATGTTTTGAATCCCAGAAGGCCAGTGATATTTATAGATACTGATATGCTGCCTGCCTTAGAGGAAAGGGATCACAAAATTGTAAATAACCCTATTGAAGCTCACATAATCGCTGAGGTTGCAAAGGAATTGGTTAAAAATGGAATTGGAGGAGAGAACATTGGCATTATTACTCCCTATAATTCACAGGCAAACCTCATCCGGCATGCTACTTGCATAACATCCTTGGAGATACATACCATTGACAAATACCAGGGTAGAGATAAAGACTGCATATTAGTATCTTTTGTACGTTCTTGTGAGAACCCAACAAGCTGTGTCGCTTCTCTACTCGGAGATTGGCACAGGATAAATGTGGCTCTTACTCGTGCTAAGAGAAAGTTGATAATGGTGGGGTCTCGTAAAACTCTATTGAAGGTTCCATTACTGAAGCTTCTGATAAAGAAAGTTGAGGAGCAATCTGGAATTTTAAATGTATCTAAGAAGGATATCTATAGAAAAGGAGAGCTCATTAGATGTTCTCAAATTGCCTGTTCAGAACAGAAATTAGATGTTCCTAAATAA 4026 0.4131 MKSRHDPNCERGKIKHQNLVTSHHKSKSELKQEEEEVETQNPKMPPKKKPNNSSSSSSSSKKPIPQPSKYGIQHFFDRHTTQHQNSQKLQSNHVADAASDPPEKSNDAEAKASGASSQASTPVNEAHTLSEVSPEMSKTTSRKRFKFSPGMFIKQSQDDGADEVTWKISPVNERLQAVSKRMPKIIQALADSSRANMLQIRRCSEDKTSLDKGDKAEELLITSTPNASTKAPLSLSKLGLKKLNPDRGVDCNGNPTTLSNSSVAGGRNPFRTPPSLSCRELAKDIEHNGPSDQPFLRQHKKALLELLDQVEDAIGVDNDTVCDKTTHSGNSQDGIADGLPVRANDLVERTKSHIPKEVVGVFSDSSYLVLEVSEKSQPAAQGPYKVLRLLNEQSGEERAVHLWDECSDTSWFGLVFSFDGSYSVVAPGDTVNIIGEFDEWGNCDINHDNNFLIVHPDILVSGTRVASSFSCPRRTVLDERLKCNEYSTAALCGTLLHQIFQAGLTNDNPTIDFLESYTEVVLQRNVESLFACGVNEKDVHKTMIDAVPRIYNWIMLFRNMEVIDIEEMAWAPKYGLKGMIDASVRVKVHSRKDRPEEKIMPVEFKTGKSPSGQARFWYQKTIDSGLLYYLQTDQTQGITVQRSDLVGLIIRRNELASEILKALVLQQLPPVLQAHGGSVENNGSGDIFDSNTNHLRSSHSKFLCHWDHLIDLEAKGTEFIKKDVWRSYNMRSRSAGGVSSIVIDASQGIPYSTSHEDNCFIYRFVPQDNSYPSIVSDDDPSSASLKNDLDLTLRSGDYVILSNESSHQTIAKGVISDISHNHISVSFSKLLRIPGRSSTEHDLLQQVWRIDKDEAVTSFAIMRFNLVQLFLQDDQSGHLRRMIVDLEAPRFDSSSIVSQDPAISYVWSEQSLNDDQRRAILKILVAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRVGRQEAVHEEVRGHCLSETNVKSVEDIKIRLEQVKVVAVTCLGISSPLLANKRFDVCIMDEAGQTTLPVSLGPLRFASTFVLVGDHYQLPPLVHSTEARENGMGMSLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGTSEIANAELEFSGLNCCLPWLEDVLNPRRPVIFIDTDMLPALEERDHKIVNNPIEAHIIAEVAKELVKNGIGGENIGIITPYNSQANLIRHATCITSLEIHTIDKYQGRDKDCILVSFVRSCENPTSCVASLLGDWHRINVALTRAKRKLIMVGSRKTLLKVPLLKLLIKKVEEQSGILNVSKKDIYRKGELIRCSQIACSEQKLDVPK 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00965 1341 MobiDBLite consensus disorder prediction 246 272 - -
Mepo3g00965 1341 Pfam AAA domain 1088 1288 IPR041679 -
Mepo3g00965 1341 MobiDBLite consensus disorder prediction 1 143 - -
Mepo3g00965 1341 MobiDBLite consensus disorder prediction 45 66 - -
Mepo3g00965 1341 Gene3D - 1110 1323 IPR027417 -
Mepo3g00965 1341 MobiDBLite consensus disorder prediction 110 136 - -
Mepo3g00965 1341 FunFam DNA replication helicase Dna2 846 1109 - -
Mepo3g00965 1341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 911 1298 IPR027417 -
Mepo3g00965 1341 Gene3D - 461 670 IPR011604 -
Mepo3g00965 1341 CDD SF1_C_Upf1 1112 1288 IPR047187 -
Mepo3g00965 1341 MobiDBLite consensus disorder prediction 1 43 - -
Mepo3g00965 1341 MobiDBLite consensus disorder prediction 75 94 - -
Mepo3g00965 1341 MobiDBLite consensus disorder prediction 250 268 - -
Mepo3g00965 1341 CDD DEXXQc_DNA2 911 1111 IPR026851 GO:0017116
Mepo3g00965 1341 Pfam AAA domain 912 1003 IPR041677 GO:0004386
Mepo3g00965 1341 Pfam AAA domain 1014 1079 IPR041677 GO:0004386
Mepo3g00965 1341 Pfam DNA replication factor Dna2 423 557 IPR014808 -
Mepo3g00965 1341 Pfam DNA replication factor Dna2 561 586 IPR014808 -
Mepo3g00965 1341 PANTHER DNA2/NAM7 HELICASE FAMILY 94 1310 IPR045055 -
Mepo3g00965 1341 Gene3D - 839 1109 IPR027417 -
Mepo3g00965 1341 FunFam DNA replication helicase 1110 1323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00965 Mepo-Chr3 13736114 13754083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00965 44 1053 Core DNA Replication Machinery Family AT1G08840 50.136 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00965 K10742 - gmx:100799415 1631.69