Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00960 ATGCTTTCTCTCCAATTCAACATCCACCATCTTCCTTCACCTCAACTCCTTCGCACCAGTAACATTTCTTCCTTCTCTCCCACCTCTTTCTCACTCTTCTACAACAAGCACCATCTTTTTCGGTATAATGTTACAACCTTAAAAAACCATAGGGTTTTTGCAATGTCTAGTAATAATGACTCTGCATTCAAGATGAACCTCAATGAGTATCTTGTTACTCTTGATAAGCCTCTTGGTATTCGCTTTGCTCTTACTTCTGATGGGAAAATCATCGTCCACTCTCTCGCCAAAGGGGGTAATGCGGAGAAGTCCAGGATAATTATGGTGGGTGACACTTTGAAGAAAGCTGGTGATTCCTCTCAGAATAGTCTAGTTGATATTAAAGACGTTGGAGATACACAGAAGGTGCTAAAGGAGCAAACAAGTTCTTTTAGCTTGGTTCTTGAGAGGCCCGCATCTACCTTTCCCATTCAACTGCTGCATAATAAGACCAATGATCTTGAAATAGTATATAATAGAGGTCGAGTACCTGTTGTCACATGGAACAAGACACTATTAGCATCAAATTTACAACCATCTAGTGATAGCTGTGGGAATTCTGGATTTTCGATGTTCAACTCAAAGTTTCTTAGTTCAAATGGAAGCAAGTTATTGGGCAATCAAAGTCAACATGCCATCACCCATGGTGAAAGAAATTCCTTAACTGAACAAACACTACAACTTGCTTGTGTTTTCACTGAAGAAGCGAGTGGAGATGGAGATTGGGCTCACGGAAGTTTTCCACTTGAGGAATATATTCAGGCTCTAGATCGTGCCAAAGATGAGATGTACTATAATCACTCTCTTGGTATGCGTTATAGTAAGATTACCGAGCAAATATATGTGGGATCCTGCATCCAAACAGGAGATGATGTGGAAACCTTGGCAAAAGTTGAGGGAGTTACTGCTGTTCTGAACTTCCAAAGTGGAACTGAAGCTGAAAATTGGGGAATCAATGTGAAATCAATCAATGACTATTGTCAAAGGAATAACATTCTCATCATCAACTATCCTATACGGGATGGAGATTCTTATGACATGAGGAAAAAACTCCCATTTTGTGTTGGGCTTTTATTACGGTTGCTAAGAAAGAATCTTCGCGTTTTTGTTACTTGCACTTCTGGATTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTACATTGGATGACAGACATTTCCCTACATGCAGCCCATACTTGGGTCACTGGGATGCACACGTGCAGGCCTGACAGGCCAGCAATTGCATGGGCAACATGGGATCTTATAGCTATGGTTGAAGGTGGCCAACATGATGCTCCCACACATGCTGTCACATTTGTATGGAATGGTCACGAGGGGGAGGATGTAAATTTGGTTGGAGACTTCACCGGAAATTGGAAAGAACCACTTAAGGCAAAGCATCGTGGTGGATCAAGACATGAAGTAGAAGTTAAACTTCCACAAGGAAAGTATTACTACAAGTTCATTGTTAATGGACAATGGAAGCATTCAACATCTTCACCAGCTGAAAGGGATGATAGCGGAAATGTTAACAATATAATAATGATTGGCGAAACTGCCAGCGTTCGTCCTTCTGTTCAGCACCAGCAAAAAGATGCCAATGTTGTAAAGGTGATTGAAAGACCTTTGAATGAAAAAGAGAGGTTTATGTTGGCAAAAGCTGCTCGTTGCATTGCTTTCTCTATCTGCCCTGTCAGATTAGCTCCCAAATAG 1755 0.4131 MLSLQFNIHHLPSPQLLRTSNISSFSPTSFSLFYNKHHLFRYNVTTLKNHRVFAMSSNNDSAFKMNLNEYLVTLDKPLGIRFALTSDGKIIVHSLAKGGNAEKSRIIMVGDTLKKAGDSSQNSLVDIKDVGDTQKVLKEQTSSFSLVLERPASTFPIQLLHNKTNDLEIVYNRGRVPVVTWNKTLLASNLQPSSDSCGNSGFSMFNSKFLSSNGSKLLGNQSQHAITHGERNSLTEQTLQLACVFTEEASGDGDWAHGSFPLEEYIQALDRAKDEMYYNHSLGMRYSKITEQIYVGSCIQTGDDVETLAKVEGVTAVLNFQSGTEAENWGINVKSINDYCQRNNILIINYPIRDGDSYDMRKKLPFCVGLLLRLLRKNLRVFVTCTSGFDRSPACVIAYLHWMTDISLHAAHTWVTGMHTCRPDRPAIAWATWDLIAMVEGGQHDAPTHAVTFVWNGHEGEDVNLVGDFTGNWKEPLKAKHRGGSRHEVEVKLPQGKYYYKFIVNGQWKHSTSSPAERDDSGNVNNIIMIGETASVRPSVQHQQKDANVVKVIERPLNEKERFMLAKAARCIAFSICPVRLAPK 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00960 584 CDD DSP_laforin-like 284 430 IPR045204 GO:0019203
Mepo3g00960 584 SUPERFAMILY PDZ domain-like 75 159 IPR036034 GO:0005515
Mepo3g00960 584 ProSiteProfiles Dual specificity protein phosphatase domain profile. 285 444 IPR020422 GO:0006470|GO:0008138
Mepo3g00960 584 Gene3D Protein tyrosine phosphatase superfamily 278 543 IPR029021 -
Mepo3g00960 584 CDD E_set_AMPKbeta_like_N 451 530 - -
Mepo3g00960 584 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 15 582 - -
Mepo3g00960 584 Gene3D Immunoglobulins 439 534 IPR013783 -
Mepo3g00960 584 SUPERFAMILY E set domains 448 531 IPR014756 -
Mepo3g00960 584 Pfam Glycogen recognition site of AMP-activated protein kinase 451 532 IPR032640 -
Mepo3g00960 584 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 275 418 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00960 136 584 Protein tyrosine phosphatase (PTP) family AT3G01510 67.111 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00960 - - mtr:25498007 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00960 3 13640527 13650101 Mepo3g00960 3 13640527 13650101 ECH