Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00920 ATGGCATCTTCAAGCGCCTACTCAAATTCACCATGTGCTGCTTGCAAGTTTTTGAGAAGGAAGTGCATGCCAGATTGCATATTTGCTCCATATTTCCCACCAGAAGAGCCACAGAAATTTGCAAATGTTCACAAAATATTTGGTGCAAGCAATGTGAGTAAACTTCTGAATGAAGTGCAACCACATCAAAGGGAAGATGCAGTGAACTCTCTTGCCTATGAAGCTGAAGCAAGGATTAAAGATCCAGTTTATGGTTGTGTTGGTGCCATTTCAGTCCTCCAAAGACAAGTTATTAGGCTCCAAAAGGAACTTGATGCTACTAACGCTGATTTGATTCGCTATACAACTTGCACTGAAATCCCAAATCATGATATCGCAGCTACAAGAATCGGTGGTGAAGATGGAGGCGGTTCTTCTCTCGGTCAATCTCCTCCTCCGGCTTTTTACTATCCGTCTCCTTGGAACAATAATGATCCACTTGGCGATGGTTTTCATACAGGAGGAGGTGACAATATATAA 519 0.4239 MASSSAYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTTCTEIPNHDIAATRIGGEDGGGSSLGQSPPPAFYYPSPWNNNDPLGDGFHTGGGDNI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00920 172 Coils Coil 90 110 - -
Mepo3g00920 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 117 - -
Mepo3g00920 172 MobiDBLite consensus disorder prediction 131 172 - -
Mepo3g00920 172 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Mepo3g00920 172 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00920 Mepo-Chr3 12984618 12985312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00920 5 117 AS2 family AT3G27650 84.071 3.04e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g00920 LOB 1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00920 - - gmx:100306630 273.863