Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00915 ATGATTGGATATGATAAAGTTGAGTTTATCAAGAGCATCTCTAAAATCTGCTTAGATTCATGGAAGACCTCTTCCTTTAGTGTTATGCAACTCAAGTGTTTTGATAGCATGTTACATTGGATAGTTATGAAAGTGATTACAGCAAATCAAACCAAAATATTTGCTGTTGGAGGATCCGAAAATTCCTCTTTATCAAATGGCGTCGTTGCTGGAGTTTGCGTCATTGCTGGAACCTGTGCAGAGTCAAGGATTAAAGGGATCATTTATGTCGACTTGTTATGTTATGCCACGTATCCTAAATGCAGTAATAATCTGATCGAATATGTCCGTGGAGAACAGAAGTTGGAAATTGCAATAGCCATGTCTTCGTCCTACTACATTTCAAATTCACTTCCTTTCCCACACTCCATCATCAACAACAAATCCCAAACCCCTTTTCTCTTCTTCAAAATCAGAAAGAAGAGCCTTATAGCCCGTTGCACTTCTTCTTCTTCTTCTGCCTTCCACAACATTCCCAAACGGCTTGAATTCGCTGCCTCAATTTTACCCGGTGGGGATTGGTGGACGCTACCCAAGCATCCAGAAGAAGACCGTGCTGAACCCACGCCCGCATTGCTTGCTCTTCGACGAATTTGGGAGCTGGTTGCTGATCAGCGATGGGTTGCATTTGTGGCGTTCGCCTCTCTTGTCTTAGCTGCTCTTTCAGAAATCACCATGCCAAGTATATTAGCAGCATCAATATTTTCAGCTCAGAGTGGTGAGACCATGGCATTCTCTAGGAATGCAATGTTTTTGGTTCTTCTATGTTTCACTTCAGGGATATGCAGTGGTTTGCGAAGTGGTTGCTTTGGAATTTTGAATGTAACCTTGGTAAAGCGTCTCCGAGAAAACTTGTATACAGCCATTCTTTTTCAGGACATATCCTATTTTGATAAAGAAAAAGTTGGTACCTTGACAAGCAGGCTTGCAGCAGATTGTCAACGGCTTTCGCATGTTATAGGAAATGATCTTCAGTTGATATTACGCAACACTTTGCAGGGATCAGGAGCAATAATTAATTTACTGGCTTTATCTTGGCCTCTAGCATTATCCGCTTTGATGATTTGTTCTGTGTTATCTGCAATTTTCATGGTTTATGGCAGGTATCAAAGAAAAGCCGCAAAGTTAACTCAAGATTTCACAGCTTGTGCCAACGACGTAGCTCAGGAGACACTTTCTTCGATAAGAACTGTCCGAGTGTATGGAACCGGAAAACAAGAATTTGAAAGGTACAATCATTGGCTACAAAAATTAGCGTTTATTAGCGGTAGAGAGAGTGTGGGTAATGGTTTATGGAATCTGAGCTTTAATACCCTTTACCGGTCAACTCAGATATTTGCAGTGCTTCTAGGAGGAGTGTCTGTTCTCAGTTGTTGTGTCACTGTTGAGCAACTTACTAAGTATGTATTATACTGTGAGTGGTTGATCTATGCTACTTGGAGGGTGACAAACAGCTTATCATCATTACTGCAGTCCATTGGAGCATCTGAACAAATTTTCCAGTTGATGAATCTTTTGCCCTGTGACCAGTTCTTAACCGAAGGAATTAAGTTGCAGAAGTTAATGGGCGATGTTCAGTTTGTAAATGTATCATTTCATTATCCTGCAAGGAGTATGATGCCTGTTCTAGAACACTTAAACTTCTCTATAAAAGCAAATCAAGTCATCGCCATTGTTGGTCTTAGTGGAAGTGGAAAGAGCACATTAATCAACCTTTTACTTCGTCTCTATGAGCCTAGTAACGGTCAGATATCTGTTGATGATATCCCTCTAAAGGAGTTGGATATCAGGTGGCTAAGGCAGAACATCGGATATGTTTCACAGGAACCCCATATCTTCAACATGGACATAAAGTCAAACATAAAATATGGTTGTCCTAGGAACATTAGTCAAGAAGATATTAAACAGGCAGCAAAACTGGCTTATGCCCATGACTTTATATCTTCACTTCCTAATGGCTATGAAACCCTTGTTGATGACAATGCCCTTAGCGGAGGACAAAAGCAGCGAATTGCCATTGCCAGGGCCATTCTTAGGGATCCAGTTATTATGATTCTTGACGAACCAACCAGTGCCTTGGATTCTGAAAGCGAACATTACATCAAGGAGGTATTGTTTACATTAAAAGACGAAGCTAAATCAAGAACCATCGTTGTCATAGCACATAGGCTTTCTACTGTAAAAGCTGCTGACAGGATCATTGTTATGGATAATGGTCGCGTTATTGAGATGGGTAACCATGAAGAGCTTATAGTAAAAAATGGGCTATATGCGAAGTTAAATAAAATTCAAGCAGATATTTTAACTTGA 2349 0.4036 MIGYDKVEFIKSISKICLDSWKTSSFSVMQLKCFDSMLHWIVMKVITANQTKIFAVGGSENSSLSNGVVAGVCVIAGTCAESRIKGIIYVDLLCYATYPKCSNNLIEYVRGEQKLEIAIAMSSSYYISNSLPFPHSIINNKSQTPFLFFKIRKKSLIARCTSSSSSAFHNIPKRLEFAASILPGGDWWTLPKHPEEDRAEPTPALLALRRIWELVADQRWVAFVAFASLVLAALSEITMPSILAASIFSAQSGETMAFSRNAMFLVLLCFTSGICSGLRSGCFGILNVTLVKRLRENLYTAILFQDISYFDKEKVGTLTSRLAADCQRLSHVIGNDLQLILRNTLQGSGAIINLLALSWPLALSALMICSVLSAIFMVYGRYQRKAAKLTQDFTACANDVAQETLSSIRTVRVYGTGKQEFERYNHWLQKLAFISGRESVGNGLWNLSFNTLYRSTQIFAVLLGGVSVLSCCVTVEQLTKYVLYCEWLIYATWRVTNSLSSLLQSIGASEQIFQLMNLLPCDQFLTEGIKLQKLMGDVQFVNVSFHYPARSMMPVLEHLNFSIKANQVIAIVGLSGSGKSTLINLLLRLYEPSNGQISVDDIPLKELDIRWLRQNIGYVSQEPHIFNMDIKSNIKYGCPRNISQEDIKQAAKLAYAHDFISSLPNGYETLVDDNALSGGQKQRIAIARAILRDPVIMILDEPTSALDSESEHYIKEVLFTLKDEAKSRTIVVIAHRLSTVKAADRIIVMDNGRVIEMGNHEELIVKNGLYAKLNKIQADILT 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00915 782 SUPERFAMILY ABC transporter transmembrane region 209 522 IPR036640 GO:0005524|GO:0016020
Mepo3g00915 782 SMART AAA_5 565 753 IPR003593 GO:0016887
Mepo3g00915 782 Pfam ABC transporter 556 704 IPR003439 GO:0005524
Mepo3g00915 782 Gene3D - 528 780 IPR027417 -
Mepo3g00915 782 FunFam Multidrug ABC transporter ATP-binding protein 530 780 - -
Mepo3g00915 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 530 777 IPR027417 -
Mepo3g00915 782 PANTHER ABC TRANSPORTER B FAMILY 203 774 IPR039421 -
Mepo3g00915 782 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 223 504 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g00915 782 Gene3D ABC transporter type 1, transmembrane domain 204 521 IPR036640 GO:0005524|GO:0016020
Mepo3g00915 782 ProSitePatterns ABC transporters family signature. 676 690 IPR017871 GO:0005524|GO:0016887
Mepo3g00915 782 Pfam ABC transporter transmembrane region 224 486 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g00915 782 CDD ABC_6TM_TAP 225 512 - -
Mepo3g00915 782 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 538 776 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00915 Mepo-Chr3 12812817 12824617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00915 293 777 Calmodulin-binding Proteins AT2G36910 34.549 3.26e-73 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00915 - - gmx:100797529 979.163