LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g00906	ATGGAGTCACCTTTTGATGGAGCTGGTTCTTTACTAAAGGTTCAGAAATCGGTTTCCGGGGTAGATCACAATCCGCCTTCGACGTCTCGGCCGCCGTTAGGAGCATCTAGAAATCAAGGGCCATCTTTCAATCATCACAGTGAAGGAAAGATGAAAGATACCTACGAGGAAGCTAAAAATGTCGAGCAACATCACAACCCTAATGGTAAATCTGACTATGCGAGCCAAACCGAAACTTTTGAAAGTTGTTTGGTAAAGAACATTTCCACAATCGAAACAAAATTGTGCATCAGCGACGATTCTACTGATCACAATTCCGTCGACATATTAGAATCTGACAATGGCATATTGGGTTCATCGAAACAAGTTATAGATCAGAAAAACTCAGAGATTACGTTTTGCTCAAGTCCACAGAATAGTTTATATTCTACCACTGACTTTCTAGAAGCCAAAGAAAGTTTCACCAACACCGGAATCACTGAATGTGTTAGTGTCGATAAGTCAGTTGAAAGTGGAGAAGTTACTAATTCAGGTGAGAGCAGGAAGACGAGCATCTGTAGAGGGAGTACTGGAAGTGATGTTAGCGATGAAAGCAGCATCAGTAGCTTGAGCAGTTCGATGTATAAACCTCACAAGGCAAATGATGTAAGATGGGAAGCAATTCAAGCGATCCGAGTTCGGGATGGGGGATTGGAAATGAGACATTTTAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCAGAGTTAAGCAGCACAAGGACTTGTTTTGCAATGAAAGTAATGAACAAGACTGAACTGTCGAGTCGCAAGAAGCTTCCGAGGGCGCAGACCGAAAGAGAGATATTGCAGTCTCTCGATCATCCATTTTTACCTTCATTGTACACACACTTTGAGACAGAATCATTCTCTTGCTTGGTTATGGAGTTTTGTCCTGGTGGGGATCTTCATGCACTCAGGCAAAGACAACCTGGGAAATATTTTTCAGAACATGCTGCAAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGAGACCTAAAGCCCGAGAACGTGTTGGTGAGAGAAGATGGTCACATAATGCTATCAGATTTCGATCTCTCTCTAAGATGTGCCGTTAGTCCAACTCTCGTTAAGTCCGCCAACTCTAACTTAGAGACAAAAGGCTCAGGATATTGCGCTCAGCCTGCTTGCATCGAACCAACTTGCGTAATTAAGCCAGACTGCATCCAACCTTCATGTTTCACGCCACGTTTTCTATCAGGCAAATCCAAGAAGAAAGAAAAGAAGTTGAAACCTAAAAACGACGTGCATAATCAGGTGACACCACTCCCTGAGCTTATGGCGGAGCCCACAAATGCCCGATCAATGTCCTTTGTTGGCACGCACGAGTACTTGGCGCCCGAAATCATCAAAGGCGAAGGTCACGGCAGTGCTGTAGACTGGTGGACATTTGGTATATTCTTATACGAGCTTTTGTTTGGTAGAACTCCATTCAAAGGTTCGGCGAATCGGGCAACTTTATTTAATGTAGTCGGGCAGCCCTTAAGATTTCCAGAATCCCCTAGTGTTAGCTTTGCTGCCAGGGACTTGATTAGGGGTTTACTTGTGAAAGAACCTCAGCATCGTCTTGCATACAGACGCGGAGCAACAGAGATAAAACAACATCCATTCTTTCAAAATATTAACTGGGCGCTGATCCGTTGTGCAACTCCTCCAGAAGTGCCGAGACAGGCCATGAAAGCAGCACTCACACCCGAGAAGAAGGCTCCTGGAGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA	1863	0.4391	MESPFDGAGSLLKVQKSVSGVDHNPPSTSRPPLGASRNQGPSFNHHSEGKMKDTYEEAKNVEQHHNPNGKSDYASQTETFESCLVKNISTIETKLCISDDSTDHNSVDILESDNGILGSSKQVIDQKNSEITFCSSPQNSLYSTTDFLEAKESFTNTGITECVSVDKSVESGEVTNSGESRKTSICRGSTGSDVSDESSISSLSSSMYKPHKANDVRWEAIQAIRVRDGGLEMRHFRLLKKLGCGDIGSVYLAELSSTRTCFAMKVMNKTELSSRKKLPRAQTEREILQSLDHPFLPSLYTHFETESFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSANSNLETKGSGYCAQPACIEPTCVIKPDCIQPSCFTPRFLSGKSKKKEKKLKPKNDVHNQVTPLPELMAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNINWALIRCATPPEVPRQAMKAALTPEKKAPGVKPSGNYLDIDFF	620

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g00906	620	Gene3D	Transferase(Phosphotransferase) domain 1	320	387	-	-
	Mepo3g00906	620	Gene3D	Phosphorylase Kinase; domain 1	234	319	-	-
	Mepo3g00906	620	FunFam	Serine/threonine-protein kinase D6PK-like	234	319	-	-
	Mepo3g00906	620	Gene3D	Transferase(Phosphotransferase) domain 1	468	592	-	-
	Mepo3g00906	620	MobiDBLite	consensus disorder prediction	20	45	-	-
	Mepo3g00906	620	PANTHER	FLIPPASE KINASE 1-RELATED	64	597	-	-
	Mepo3g00906	620	FunFam	serine/threonine-protein kinase D6PK-like	320	387	-	-
	Mepo3g00906	620	Pfam	Protein kinase domain	471	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00906	620	Pfam	Protein kinase domain	237	390	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00906	620	CDD	STKc_phototropin_like	234	594	-	-
	Mepo3g00906	620	MobiDBLite	consensus disorder prediction	1	49	-	-
	Mepo3g00906	620	FunFam	serine/threonine-protein kinase D6PK-like	469	592	-	-
	Mepo3g00906	620	ProSiteProfiles	Protein kinase domain profile.	236	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00906	620	MobiDBLite	consensus disorder prediction	171	206	-	-
	Mepo3g00906	620	SUPERFAMILY	Protein kinase-like (PK-like)	209	594	IPR011009	-
	Mepo3g00906	620	SMART	serkin_6	236	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g00906	620	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	357	369	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g00906	Mepo-Chr3	12719525	12724246	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g00906	179	620	AGC Kinase Gene Family	AT5G47750	75.711	0.0	693

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Mepo3g00906		Pkinase	4e-38	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g00906	3	12719525	12724246	Mepo3g00906	3	12719525	12724246	ECH