Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00882 ATGGCTAGGGAATGGCTAATTAACATAAGAGGATTTGCAAAGAAATTGAGAAGTACTACACTCTCTTCAGCTGATCAGATCAAGGATTGCGGCGCATGTCGTGAATGTCCAAACTGTCATTGTCGTATAGACAACAGTGATGTTTCTAGTGAGTGGCCTGGCTTTCCCCTCGGTATAAAGTTTGATCCTTCTGATGTGGAAATATTGGAGCATTTAGCGGCTAAATGCGGTGTTGGGAACACAAAGCCTCACATGTTTATCGAGGAGTTCATACCAACATTGGAAGGAGAGCAAGGCATTTGCTATACACATCCTGAAAATCTTCCAGGTGCTAAGAAAGATGGGAACAGTGTTCATTTCTTTCACAGAACAATGAATGCATATAGTTCCGGTCAACGAAAGCGCCGAAAGATTCATCATCGTGGTTCGACTGAAGACCATGTACGCTGGCACAAGACTGGTAAGACCAAAGCTATAATAGAACATGGAGAGCATAAGGGATTTAAGAAGATCATGGTTCTGTATATAAGATCTGAGAAAGAGTCCAAGTCCTACAAATCTGACTGGAAAATGCACCAGTACCATCTAGGGACTGATGAAGACGAGAAGAATGGAGAATATGTCGTTTCAAAAATATTTTATAAGCAGAATGAGAAAAATGAAGAGAAACAAATGGCTGAAGAACCTGACAGTATAACATCGCGAACAAGTCCAAGGACTCCAAAACCAAATCCTCCAAATCCACCGCGCACAGGAAAATGTGTTGACAACGGTGACATTGATGAAAGTTCACTGTTGCAATTTGCAGAGGATGCCAAGTCTATCCCTGTAGAATCAAATGCCATGCAGTCTGATATTCAGGATCAAGAAAACACATACAACTTTCCATGGTTAGCTGGTGAATCACAGGCAGCCATGCAATCTGATATTCAGGATCATGACAACTTTGCATGGTTGGCTGGTGAATCACAGGCTGTCCTGCAATCTGATATTCAGGATCACGACAACTCTGCATGGTTGGCTGGTGAATCGCAAGCTGCCCTGCAAACTGATATTCAGAATCAGGACAACACAAACAACTCTGCATGGTTGGCTGGTGAATCACAGGCTATGGACAATTTGGAATATGCCGGCTTGGATGACCTATTATTGTGTGACGAGATTTTTGATTCATCTGCTCTATTTACTGATTCTCAATTGGACTCGATCAATGACCTCCCTTACTATGAAAACAGAATGACAGGAAACCATAATGTATCTAGTGAAACTTCAACTGCTGTCCTGGATACACTGGAATTGGATACTCCTCCAGATTTTGATCTTTCGAATTTGACATTTGGTTCTCAAGACAGTATCCTTGGTATGACAGGCTTGCTATGA 1380 0.4196 MAREWLINIRGFAKKLRSTTLSSADQIKDCGACRECPNCHCRIDNSDVSSEWPGFPLGIKFDPSDVEILEHLAAKCGVGNTKPHMFIEEFIPTLEGEQGICYTHPENLPGAKKDGNSVHFFHRTMNAYSSGQRKRRKIHHRGSTEDHVRWHKTGKTKAIIEHGEHKGFKKIMVLYIRSEKESKSYKSDWKMHQYHLGTDEDEKNGEYVVSKIFYKQNEKNEEKQMAEEPDSITSRTSPRTPKPNPPNPPRTGKCVDNGDIDESSLLQFAEDAKSIPVESNAMQSDIQDQENTYNFPWLAGESQAAMQSDIQDHDNFAWLAGESQAVLQSDIQDHDNSAWLAGESQAALQTDIQNQDNTNNSAWLAGESQAMDNLEYAGLDDLLLCDEIFDSSALFTDSQLDSINDLPYYENRMTGNHNVSSETSTAVLDTLELDTPPDFDLSNLTFGSQDSILGMTGLL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00882 459 Pfam No apical meristem (NAM) protein 56 196 IPR003441 GO:0003677|GO:0006355
Mepo3g00882 459 Gene3D NAC domain 64 220 IPR036093 GO:0003677|GO:0006355
Mepo3g00882 459 MobiDBLite consensus disorder prediction 218 259 - -
Mepo3g00882 459 ProSiteProfiles NAC domain profile. 55 215 IPR003441 GO:0003677|GO:0006355
Mepo3g00882 459 FunFam NAC domain-containing protein 8 64 219 - -
Mepo3g00882 459 SUPERFAMILY NAC domain 40 215 IPR036093 GO:0003677|GO:0006355
Mepo3g00882 459 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 327 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00882 Mepo-Chr3 12431372 12436285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00882 36 233 NAC Transcription Factor Family AT1G28470 49.515 1.43e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g00882 NAM 1.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00882 - - mtr:25497909 839.721