Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00867 ATGGAGAATCTCTCACAGCTAGCGACTGATCATAATTGGGGAGCTCAATCTTTAAACATCACAGGATCTGTTCCAATATATGGCTTTGCACAATGTTTTCAAGATCTCTCTCGTACTGATTGTCTTCTTTGCTATGCTGCAAGTCGGACTAAGCTCCCTCGTTGCCTCCCTTCGCTATCAGCTCGCATCTATCTTGACGGTTGCTTCCTTCGTTACGATAATTATAGTTTTTACTCAGAGGAAACTGACCCTTTGAGGGATAAAGATGCTGGTGGTGCTGGTGATGGTGGTGGATTTTCTGTTGGAGAAGTTGAGGGTGTTTATGCCTTAGCACAATGCTGGAAAACTCTTGGGATTGATGAGTGTAGAGATTGTTTGAGCAATGTTGTGAAGAAGGTTAGAGGGTGTTTGCCAAATAGTGAAGGTAGGGTTTTGAATGCTGGATGCTATTTGAGATACTCAACACACAAATTTTTCAATGAAAGAGGTGGAACAGATGGTGGAAATGGATCGTTAAGAAGAGGAGCTGTAATAGCAGCAGTGTTAGCAATAGCTGCAATTATTATGCTTGCTCTCTCAGCCTCTTTTGCAGTCTACAAAAAATTGTCAAATCTAAAAAAAGAAAAAAATAATCGCGATCAAATTTCATCCTCCATAACAAAATCTAGTTTGAATTACAAATACGAAACGCTTGAGAAGGCGACAGATTATTTCAACTCTTCAAGAAAAATAGGGCAAGGAGGATCAGGTTCAGTTTTCAAAGGTATTCTCCCTAATGGAAATGTTGTTGCAGTGAAGAGATTGGTATTCAATAATAGGCAATGGGTGGATGAGTTCTTCAATGAAGTAGATTTGATCAGTGGCATTGAACACAAAAACCTTGTCAAACTATTAGGTTGTAGCATTGAAGGACCTGAGAGCCTACTTGTATATGAGTACTTACCCAACAAGAGTTTAGATCAATTTATCTTTGAAAAGAGCAGAACTCAAATTCTAAATTGGAAGCAGAGGTGTAACATCATTCATGGAACAGCAGAAGGGCTTGCTTATCTTCATCAAGGTTCTATTAAAAGAATCATTCATAGAGATATCAAAAGCAGCAATGTTCTTCTCGATGATAATCTCTCTCCGAAGATTGCAGATTTCGGTCTTGCGCGATGTTTTGCTACTGATAAAACACATTTGAGTACTGGAATTGCTGGAACACTTGGTTACATGGCTCCGGAGTACCTAATTCGAGGACAGCTTACAGATAAAGCCGATGTCTATAGTTTTGGAGTACTTGTTCTTGAGATTGTATGTGGCAGAAGGAATAATGCCATCAGAGAGGACTCTGGATCACTTCTACAAACTGTCTGGAAACATTACCGATCAAACACATTAGTTGAGACTATCGATTCTAGCTTGGGAGATGATATTCCAGAAGCTGAGGCATCAAGGGTGTTACACATTGGCTTGCTTTGCACACAAGCTTCTGCTTCTCTTAGACCATCCATGACTCAAGTTGTTAAAATGCTAAGTAATTCAGATTTAGATGTTCCTGCACCAAATCAGCCACCATTTTTAACCAGTGCAATTTTAGACTCAGAAAGTTCCATTAGATCTTATAGTACAAACAGCTTTGTATCTAATGCTTTAAAAAAGATTGGAGTTTCATACAGTTATTCAGAGTCCACTGGTTCTCGCAATTCAGACAAGCCATCAAGAAGTGAAGAACCAATTATCCAAGCTTGA 1734 0.3922 MENLSQLATDHNWGAQSLNITGSVPIYGFAQCFQDLSRTDCLLCYAASRTKLPRCLPSLSARIYLDGCFLRYDNYSFYSEETDPLRDKDAGGAGDGGGFSVGEVEGVYALAQCWKTLGIDECRDCLSNVVKKVRGCLPNSEGRVLNAGCYLRYSTHKFFNERGGTDGGNGSLRRGAVIAAVLAIAAIIMLALSASFAVYKKLSNLKKEKNNRDQISSSITKSSLNYKYETLEKATDYFNSSRKIGQGGSGSVFKGILPNGNVVAVKRLVFNNRQWVDEFFNEVDLISGIEHKNLVKLLGCSIEGPESLLVYEYLPNKSLDQFIFEKSRTQILNWKQRCNIIHGTAEGLAYLHQGSIKRIIHRDIKSSNVLLDDNLSPKIADFGLARCFATDKTHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEIVCGRRNNAIREDSGSLLQTVWKHYRSNTLVETIDSSLGDDIPEAEASRVLHIGLLCTQASASLRPSMTQVVKMLSNSDLDVPAPNQPPFLTSAILDSESSIRSYSTNSFVSNALKKIGVSYSYSESTGSRNSDKPSRSEEPIIQA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00867 577 Gene3D Transferase(Phosphotransferase) domain 1 314 514 - -
Mepo3g00867 577 SMART serkin_6 238 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00867 577 ProSitePatterns Protein kinases ATP-binding region signature. 244 266 IPR017441 GO:0005524
Mepo3g00867 577 FunFam Cysteine-rich receptor-like protein kinase 3 78 158 - -
Mepo3g00867 577 ProSiteProfiles Protein kinase domain profile. 238 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00867 577 CDD STKc_IRAK 244 506 - -
Mepo3g00867 577 Pfam Protein kinase domain 239 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00867 577 FunFam Cysteine-rich receptor-like protein kinase 2 205 313 - -
Mepo3g00867 577 MobiDBLite consensus disorder prediction 555 577 - -
Mepo3g00867 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 359 371 IPR008271 GO:0004672|GO:0006468
Mepo3g00867 577 Pfam Salt stress response/antifungal 23 75 IPR002902 -
Mepo3g00867 577 Pfam Salt stress response/antifungal 103 155 IPR002902 -
Mepo3g00867 577 Gene3D Phosphorylase Kinase; domain 1 198 313 - -
Mepo3g00867 577 SUPERFAMILY Protein kinase-like (PK-like) 221 534 IPR011009 -
Mepo3g00867 577 ProSiteProfiles Gnk2-homologous domain profile. 1 77 IPR002902 -
Mepo3g00867 577 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 27 532 - -
Mepo3g00867 577 FunFam Cysteine-rich receptor-like protein kinase 42 1 77 - -
Mepo3g00867 577 Gene3D - 1 77 IPR038408 -
Mepo3g00867 577 Gene3D - 87 158 IPR038408 -
Mepo3g00867 577 FunFam Cysteine-rich receptor-like protein kinase 2 314 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00867 Mepo-Chr3 12245654 12248643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00867 1 403 Receptor kinase-like Gene Family AT5G40380 58.392 7.33e-172 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g00867 Pkinase 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00867 - - gmx:100790404 890.567