Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00832 ATGTGCAACAAGAATAGTACTACTCTTTCACCACCAAAAACAAGAACAAAAACAAAAACAAAATCTATTACTATGAAGAAGAGAAAGAAACAAACCAAAAAGAATATATGTTCATCAATTTCACCTTCTTCATCTTCATCTTCCTCTTCACTAAAATCACGTAGAAACAAAACAAAAAGAAAAAAACCAAAGTATCTTAGTCTACGTTTACAGCTCTCAAAAACAGAAAAAAACAAAGACCAACCCAAAAACAGCAACAACAAAAAAACACCAAAACAAGAACAACAACAACAACATCCTCAAGTAGTGAATTTGTTTGCTCATCATCGTGAAATAGAACACGATATGAACGAAGAAAACAATGTAGCGTTACTCTTCACATCAGACGGTGGAGCAACGCTAAACGGTCTTCTAGAAGATGAATCGACTACGTTAACAGCGGCGACGACGACGGAGGAAGAGGAGGAGTCATTGTCAGTGATGAGGTGTCCGGTGATGGATCAAGGGTTGGTGAGGAAAGCAATGAGAAGGAAGAGAAATGATGAAGAGAGTGAAGAGAGATGGGTGAGTTATTCAGAAGTTGTTGAAGAGACCAAGAAAGAAATGATGGAGGAAGTTAATAGTACTTGTGTTGGATTTGAAACGACGTCGTTTTTTGGGTCTTTGAGTTTGAAGCTTGATCATGATGGGATATTGAATGCTTGGTCTGATAAAGGTTCGCTTTATGTTGATGGGTTTGATGAAGCTCCTCAGACTGTTCCTGATTTGTTCGGTGGTTCCATCCTTCCCAATGTATTATGGGATGGTTATGGGTGTGATGTTAATGGGAACACATGGAAAGTTCCTGAAGGTGTTGGAGCTAACAATAACATTGTGAAGGTGAAGGAAGAAATGGGTTGGAAGCTTGGGCAGAGAGAGGCAAGTTTGTTGAGATACAAAGAGAAGAGGCAAAGCAGACTCTTTGCTAAGAGAATCCGTTATGAAGTTCGCAAGTTGAATGCCGAAAAACGGCCTAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 1047 0.3954 MCNKNSTTLSPPKTRTKTKTKSITMKKRKKQTKKNICSSISPSSSSSSSSLKSRRNKTKRKKPKYLSLRLQLSKTEKNKDQPKNSNNKKTPKQEQQQQHPQVVNLFAHHREIEHDMNEENNVALLFTSDGGATLNGLLEDESTTLTAATTTEEEEESLSVMRCPVMDQGLVRKAMRRKRNDEESEERWVSYSEVVEETKKEMMEEVNSTCVGFETTSFFGSLSLKLDHDGILNAWSDKGSLYVDGFDEAPQTVPDLFGGSILPNVLWDGYGCDVNGNTWKVPEGVGANNNIVKVKEEMGWKLGQREASLLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKRE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00832 348 MobiDBLite consensus disorder prediction 1 100 - -
Mepo3g00832 348 MobiDBLite consensus disorder prediction 53 67 - -
Mepo3g00832 348 MobiDBLite consensus disorder prediction 73 87 - -
Mepo3g00832 348 MobiDBLite consensus disorder prediction 19 34 - -
Mepo3g00832 348 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 25 348 - -
Mepo3g00832 348 ProSiteProfiles CCT domain profile. 305 347 IPR010402 GO:0005515
Mepo3g00832 348 MobiDBLite consensus disorder prediction 1 18 - -
Mepo3g00832 348 Pfam CCT motif 305 347 IPR010402 GO:0005515
Mepo3g00832 348 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00832 Mepo-Chr3 11883315 11887242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00832 221 347 C2C2-CO-like Transcription Factor Family AT1G73870 44.186 2.70e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g00832 CCT 4.6e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00832 - - psat:127128050 427.557