Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00812 ATGTTCACATTTAGTCCAATGAGATATTTATATCTCAATCTTGTTGTTCTTTTCTTGTTTTTCTCTATCCATAGCACTCATGAGCTACAATTTGCTCAAACTCAAGTCTTGTTACAGTTAAGGAAGTACCTGGAATATCCAACTTCTTTGCAAATTCTGGAAAATTACAATTTAGACCTTTGTAGCCTTCCTCCATCTGAACATTTGAGCATTAAATGTGAGGGCAATTCAGTAACTGAGCTCAAAATTATGGGGAACAATCATAAACATGTAAAGGTTGAAAGTTTCAATGGATTTGCAGTTTCCAATCATACTCTATCCAAAAGCTTCTCTATTGATTCTTTTGTCACAACATTGACAAGGTTAACAAGTTTAAGGGTACTTAGTTTGGTTTCTTTAGGAATTTGGGGTCCACTTTCTGATAAAATTCATAGGCTATCTTTGCTTGAAGTTTTGGATTTGAGTTCAAATTTCTTATTTGGTTCTATTCCACCAAAGATAGCTACATTGGTGAATCTTCAAATATTAATACTTGATGAAAATTATTTTAACACTACAATGCCTAATTTCTTTGAACCTTTGGTTAATCTAAGTATTTTGAGTTTGAAAAACAATAACTTAAAGGGCTCATTCCCTTCTTCACTATGCAAAATCAAAACTCTCACTGTTATTTCCTTGTCACATAATGAATTATCTGGTGAATTGCCTAATCTCACCACACTATTTGGTTTACATGTTTTGGATTTAAGAGAGAATGGTTTTGATTCTGAGCTACCATTGATGCCGAAATCGGTCGTCACGGTATTGCTAAGTAAAAACTCATTCTCAGGTGAGATTCCTGTTAAATTTGGTGAGTTGAATCAGCTTCAACATCTTGATCTTTCGTCGAATCGTCTTAGCGGGGTTCCGCCATCTTCTTTGTTCTCTTTGACAAATATTAGTTTTTTGAATTTAGCAAAAAATGTGCTAAGTGGTTCAATTCCACAGAAACTAAAATGTGGAAGCAAACTTGGGTTTGTGGATATTTCTAGTAACAAGTTAAGTGGTTTACTTCCTTCTTGTTTGGAAAGTATTTCTGATAGAAGAGTTGTTAGGTTTGGTGGAAACTGTTTATCTGTTAATTCTCAAGCTCAAAAGCATGGTTCTTATTGTAATGAGTCTAGTTCCGGAAAGACGAAATTTTGGAGATGGGAAGTTGATGCTGCAATTGCCATCATTGTTGTAGTTTTTCTCTTGCTGTTAGCTTTTGGAGTTTTGTTTTACAGAAAGTGTCATTCTCATTCAAGAGAGATTTATAGGCACGAGATGTTGCCGAAGATTGTTCAAGATAACAACTCAACAACGGGAGTTTCCTCCGAACTCCTTGCTAGTGCAAGATATATTTCTCAAACAATGAAGCTAGGTACACAAGCTACTCCAACTTGTAGACACTTTTCAATTGAAGAGTTGAAGGAAATTACAAGAAACTTTGATTTGTCAACTTATATTGGTGAAGGATCTGTAGGAAAGCTGTACAAAGGTAAACTAGAGAATGGATCTTATGTGATGATAAGAACATTGACTCTGAGAAAGAAGTTCTCAACACAAAATCTCAAAGCTAGGTTGGATTTACTCTCAAAGCTTCACCATCCAAATTTGGTTAGTCTTTTGGGTCATTGTATCGATGGTGGTGGAAAAGATGTTACTAGTACCCACAAACTTCATCTTCTTTACGAGTATGTGCCAAATGGCGATTATCGTACCCATTTGTCAGGTTAG 1758 0.3521 MFTFSPMRYLYLNLVVLFLFFSIHSTHELQFAQTQVLLQLRKYLEYPTSLQILENYNLDLCSLPPSEHLSIKCEGNSVTELKIMGNNHKHVKVESFNGFAVSNHTLSKSFSIDSFVTTLTRLTSLRVLSLVSLGIWGPLSDKIHRLSLLEVLDLSSNFLFGSIPPKIATLVNLQILILDENYFNTTMPNFFEPLVNLSILSLKNNNLKGSFPSSLCKIKTLTVISLSHNELSGELPNLTTLFGLHVLDLRENGFDSELPLMPKSVVTVLLSKNSFSGEIPVKFGELNQLQHLDLSSNRLSGVPPSSLFSLTNISFLNLAKNVLSGSIPQKLKCGSKLGFVDISSNKLSGLLPSCLESISDRRVVRFGGNCLSVNSQAQKHGSYCNESSSGKTKFWRWEVDAAIAIIVVVFLLLLAFGVLFYRKCHSHSREIYRHEMLPKIVQDNNSTTGVSSELLASARYISQTMKLGTQATPTCRHFSIEELKEITRNFDLSTYIGEGSVGKLYKGKLENGSYVMIRTLTLRKKFSTQNLKARLDLLSKLHHPNLVSLLGHCIDGGGKDVTSTHKLHLLYEYVPNGDYRTHLSG 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00812 585 Gene3D Phosphorylase Kinase; domain 1 451 573 - -
Mepo3g00812 585 Gene3D Ribonuclease Inhibitor 262 393 IPR032675 -
Mepo3g00812 585 Gene3D Ribonuclease Inhibitor 166 261 IPR032675 -
Mepo3g00812 585 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 453 573 - -
Mepo3g00812 585 SUPERFAMILY L domain-like 117 372 - -
Mepo3g00812 585 Gene3D Ribonuclease Inhibitor 32 165 IPR032675 -
Mepo3g00812 585 SMART LRR_typ_2 170 193 IPR003591 -
Mepo3g00812 585 SMART LRR_typ_2 194 218 IPR003591 -
Mepo3g00812 585 SMART LRR_typ_2 286 309 IPR003591 -
Mepo3g00812 585 SMART LRR_typ_2 146 169 IPR003591 -
Mepo3g00812 585 Pfam Leucine rich repeat 266 323 IPR001611 GO:0005515
Mepo3g00812 585 Pfam Leucine rich repeat 172 231 IPR001611 GO:0005515
Mepo3g00812 585 ProSiteProfiles Leucine-rich repeat profile. 288 309 IPR001611 GO:0005515
Mepo3g00812 585 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 30 263 - -
Mepo3g00812 585 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 117 449 - -
Mepo3g00812 585 Pfam Protein tyrosine and serine/threonine kinase 492 583 IPR001245 GO:0004672|GO:0006468
Mepo3g00812 585 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 265 389 - -
Mepo3g00812 585 SUPERFAMILY Protein kinase-like (PK-like) 470 583 IPR011009 -
Mepo3g00812 585 ProSiteProfiles Protein kinase domain profile. 490 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00812 Mepo-Chr3 11403942 11406601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00812 12 584 Miscellaneous Gene Families AT5G14210 55.766 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mepo3g00812 PK_Tyr_Ser-Thr 2.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00812 - - gmx:100813412 802.357