Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00794 ATGGGCATAGTAGAAATGATGATTACATTCCACATGAGAGCTTTGGTCTTTTTCCTTTGGCTCTTTCTCTCTTCATTTGGTAAAAACCTTCAAACCTGTGAAACAACATCATCACATGGTTCTAGCTACCATTGCAATGAAAATGAGTCACATAATCATCACTGTGAAACATTTGCACTCTTTTTCACAAACTCTCACTACTACTCTCTTTCAAATCTTACCCTATACTTAGGACTCAACAAGTTTGTCATTGCAGAAACCAATGGTTTCTCTTCAGAAACTGAGTTCCTTCCACAGAATCAACCTCTTCTTATACCAATTGATTGCAAATGCAAAAAGGGTGATTTTCAAGCTGAGTTAACAAAAACTACTATCAAAGGTGAGAGTTTTTATGACATTTCTCAATCACTTGAAGGTTTAACAACATGCAAGGCTATTAAAGAGAATAACCTTGGTTTGTCACCTTGGAACCTTGATGCTGAACTCAAATTGATTATCCCTTTGAAATGTGCTTGCCCTTTTTCTTCTCTTGTTATACCAAAACCAAAACTTGTTCTTTCTTATCCTATAATTGAAAATGATACAATTTCAAATTTGGCCTTAAAGTTCAATATTACAAAAGAAGCTATTGTTATTGCCAATAACATTTCATCAGAAGAAAGAAGCTTAGAACCTTTTACATCTGTTCTAATTCCATTGAATGGTAAACCTTTCCTTGATCCTTTAGCTAAGCCAAAACAACCCAATACAAATTTTCCAAAAACCAACAATATTCCAATAAATAGTCAACACAAGAAGCCAACAATGAGAAAGAGTGAATTGTATATTGGTTTAATTGGTGTTGCAATTGGACTTTTCTTTGCTTTATTAGTAGCTTTTTTCTTTATCTGGTTGAAACAGAAGAAGGTGGAAGAAAATGCATGCAAAGAAAGAGATATGGAGTTACAATATCTAAATCAAAGTGTGAGAACAACAAGTGATAAGAAAGTTTCATTTGAAGGGTCACAGGACACACTTGATAGTAAAATCATTGATGCGACGCCGCGTAAGATGTTATTGGAGACATATACAATTGATGATTTGAGAAAAGCAACAGAGGATTTCAGTTCAAATTGTCACATTGAAGGGTCAGTTTTTCATGGCATTTTAAATGGTAAGAACATGGCAATCAAAAGAATAAAAACTGAGATTTTGTCAAAATTAGACTTTGATCTGTTTCATGATGCAATTCATCATCATCCTAACATAATTAGCCTTTTTGGAACAAGTATTTCAGAAGGGTCAGATTCAGAGTCATTTTTGGTTTTTGAGTATGCCAAAAATGGCTCATTGAAAGATTGGCTTCATGGTGGCTTGGCCATCAAGAATCAATTCATTTCATCTTGCTACTGTTTCTTGAATTGGAACCAAAGGCTTAGGATTTGTCTTGATGTTGCAAGTGCTTTGGATTACATGCACCATGTAATGATACCAAGTTATGTGCATAGAAATGTGAAGAGTAGGAACATCTTTTTAGATGAGGAATTCGGTGCTAAGTTAGGTAATTTTGGTATGGCAAGTTTTGTTGAAAATGAAACTGAGGATCCTCAATTTTATTCAACTAATTATGCTTCTTGGAGTATTGGTTATTTAGCACCTGAATATGTTCACCAAGGTATAGTTTCAACAAGCATTGATATATTTGCTTTTGGTGTGGTTTTGTTAGAAGTTTTATCTGGTCAAACACCTATAAGTGGATCAAGCTGTGATAAAGGTGAAGGAAGTGTTTGGCTTAGTGACAAAATAAAGACAATTTTGATGTCAGAAAATAATGTGAATGAGTTATTAAGTGAGTGGATAGATAGTGCATTAGGTGAGAATTTCTCATTTGATGCAGCTTTGGAAGTGGCTAATATTGCAAGAGCTTGTGTGGAGGAAGATTGTTGTTTGAGGCCTAGTGCAAGGGAAATTGTTGAGAAGCTATCAAGATTGGTGGAGGAATTACCAAATGAGGAACAACAAGTTTTGATGAGTGAAAGCTCTTCCAAACCTCTGGTTGGAGCACTAGAAAGCAGTATGTGA 2061 0.3484 MGIVEMMITFHMRALVFFLWLFLSSFGKNLQTCETTSSHGSSYHCNENESHNHHCETFALFFTNSHYYSLSNLTLYLGLNKFVIAETNGFSSETEFLPQNQPLLIPIDCKCKKGDFQAELTKTTIKGESFYDISQSLEGLTTCKAIKENNLGLSPWNLDAELKLIIPLKCACPFSSLVIPKPKLVLSYPIIENDTISNLALKFNITKEAIVIANNISSEERSLEPFTSVLIPLNGKPFLDPLAKPKQPNTNFPKTNNIPINSQHKKPTMRKSELYIGLIGVAIGLFFALLVAFFFIWLKQKKVEENACKERDMELQYLNQSVRTTSDKKVSFEGSQDTLDSKIIDATPRKMLLETYTIDDLRKATEDFSSNCHIEGSVFHGILNGKNMAIKRIKTEILSKLDFDLFHDAIHHHPNIISLFGTSISEGSDSESFLVFEYAKNGSLKDWLHGGLAIKNQFISSCYCFLNWNQRLRICLDVASALDYMHHVMIPSYVHRNVKSRNIFLDEEFGAKLGNFGMASFVENETEDPQFYSTNYASWSIGYLAPEYVHQGIVSTSIDIFAFGVVLLEVLSGQTPISGSSCDKGEGSVWLSDKIKTILMSENNVNELLSEWIDSALGENFSFDAALEVANIARACVEEDCCLRPSAREIVEKLSRLVEELPNEEQQVLMSESSSKPLVGALESSM 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00794 686 ProSiteProfiles Protein kinase domain profile. 347 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00794 686 Gene3D Phosphorylase Kinase; domain 1 342 438 - -
Mepo3g00794 686 Gene3D Transferase(Phosphotransferase) domain 1 439 676 - -
Mepo3g00794 686 Pfam Protein kinase domain 376 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00794 686 ProSiteProfiles LysM domain profile. 186 231 IPR018392 -
Mepo3g00794 686 SUPERFAMILY Protein kinase-like (PK-like) 351 654 IPR011009 -
Mepo3g00794 686 FunFam PTI1-like tyrosine-protein kinase 3 439 668 - -
Mepo3g00794 686 Pfam LysM domain 126 167 IPR018392 -
Mepo3g00794 686 Pfam LysM domain 191 232 IPR018392 -
Mepo3g00794 686 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 18 661 - -
Mepo3g00794 686 Coils Coil 647 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00794 Mepo-Chr3 11188845 11191130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00794 34 679 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 39.466 1.84e-145 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mepo3g00794 Pkinase 1.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00794 - - tpra:123891373 1155.97