Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00779 ATGGAGAAAGGATGTGCAAGGAAGAAAATTGAGTTCAAAGTTGAAAGAGAAGAGATGGCTGGGCAATCAAACCATGAACTCTCACTCTTTTCAGCAGAGGAGCTTGAGTTCATCGCTGAGGACGAGATTGTCGACATCGTGCCTAATCTCAAAATGGATCCTCTTTGTCTCATCTCTGGAGATTTTGGTCCATTTACGCCACAGATTGTTACTCAAGTACCACTTTGGTTGGCAATTGCTCTCAGGAGGAGAGGCAAGTGCTCCATTGTCCCTCCCCAGTGGATGACTGTTGATAAGTTGACAGAAGTGTTGGAAGCAGAGCGAAACTCCCAAGAGATGTCGGAGCATTTGCCATTTCATTATGTAGAAATTTCAAGACTTCTTTTTGACCATGCACGTGACAACATTACTGATGCATACATGGTGAGATCTCTAATTGAGGACATCAGAGATGTAAGGTTTCATAAAGTTGAAACTGACTTGGAGGCATTCAATGATCGTACATTTGCTGTGAAGATTAAAAATTTATCTGCAATGGAAGTAAATATTGTTCGCCCATTTATTGGGAGAGCTTTACAAGCATTTTACAAGCATGACAGTCCAGATTTGAACCCAGACCCAGAGCGAGTTTCGGATAGACGGCCACAAGTTGTCCGCAATGCTCCAAGAAGGCAACTACGAAGATAG 687 0.4279 MEKGCARKKIEFKVEREEMAGQSNHELSLFSAEELEFIAEDEIVDIVPNLKMDPLCLISGDFGPFTPQIVTQVPLWLAIALRRRGKCSIVPPQWMTVDKLTEVLEAERNSQEMSEHLPFHYVEISRLLFDHARDNITDAYMVRSLIEDIRDVRFHKVETDLEAFNDRTFAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPDLNPDPERVSDRRPQVVRNAPRRQLRR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00779 228 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 25 220 IPR007257 GO:0005634|GO:0006260
Mepo3g00779 228 MobiDBLite consensus disorder prediction 199 228 - -
Mepo3g00779 228 MobiDBLite consensus disorder prediction 201 219 - -
Mepo3g00779 228 PIRSF GINS_PSF2 20 228 IPR007257 GO:0005634|GO:0006260
Mepo3g00779 228 SUPERFAMILY PriA/YqbF domain 30 90 - -
Mepo3g00779 228 CDD GINS_A_psf2 84 200 - -
Mepo3g00779 228 Gene3D - 30 95 - -
Mepo3g00779 228 SUPERFAMILY GINS helical bundle-like 91 199 IPR036224 -
Mepo3g00779 228 CDD GINS_B_Psf2 31 92 - -
Mepo3g00779 228 FunFam DNA replication complex GINS protein PSF2 96 211 - -
Mepo3g00779 228 Gene3D - 96 206 - -
Mepo3g00779 228 FunFam DNA replication complex GINS protein PSF2 30 95 - -
Mepo3g00779 228 Pfam GINS complex protein 71 180 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00779 Mepo-Chr3 10966194 10972483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00779 19 166 Core DNA Replication Machinery Family AT3G12530 66.892 7.47e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00779 K10733 - gmx:100780528 367.466