Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00771 ATGGGAGAGAGTTCTTTGAACCTTTTAGAAAGTGCAACAAAAAACATCAAAATGGAAGAAGAAGTTGAAAGAGAAGAAGAACAAGAAATAGATCCAGAAAGTAGCAATCCATTAAACCAGAGATTGATCAAGAGGAATAGAACACTATCATCAAGTCCACTTGCTCTTGTTGGTGAAAAAGTTTCATACATAGAAAGCTTAGATTATGAGACTAATGAGAATGATCTATTCAAAGATGGTTGGAGAAGTAGATCAAGAATTGAAGTATTACAATACATATTCATGAAATGGGTGCTTGCATTTCTTGTTGGACTTCTCACTGGTATTATAGCTACTCTTATAAATCTTGCTGTTGAGAACATTGCTGGATACAAGTTTTTGGCTGTTCTTAAATACATCAATAGAGAAAGGTACTTGGAAGGTTTCCTATATTTCATGGGAATTAATTTCGTTTTAACATTTGTTGCTGCTATTCTGTGTGTGTGTTTTGCACCCACAGCAGCTGGTCCTGGAATACCTGAAATCAAAGCTTATCTTAATGGTGTTGATACACCTAACATGTTTGGTGCTACAACAATGATTGTTAAGATTATTGGAAGCATTGGAGCTGTCTCTGCAGGACTAGATCTTGGAAAAGAAGGACCCTTAGTGCATATAGGAAGTTGCATAGCTTCCTTACTAGGTCAAGGAGGCCCTGACAATTACAAAGTCAAATGGCGCTGGCTGCGATATTTCAATAATGATCGTGACCGTCGGGATCTTATTACCTGTGGTGCATCTTCAGGTGTTTGTGCAGCGTTCAGGTCCCCTGTCGGTGGAGTTCTCTTCGCCCTTGAAGAGGTAGCAACCTGGTGGAGAAGTGCTCTTCTATGGAGAACTTTTTTTTGCACAGCTGTGGTGGTGGTAATTCTTAGGGCCTTCATTGAAATCTGCAACTCCGGGAAATGTGGCCTTTTTGGTGCAGGCGGGCTGATCATGTTTGATGTTAGCAATGTTACTGTTAGGTACAATGTGATGGATATCCTCCCTGTTGCAGTCATTGGAATCATAGGTGGATTATTGGGAAGCCTTTATAATCATCTTCTACACAAGGTCCTCAGACTCTACAATCTAATCAATCAGAAAGGAAAAATACATAAACTCCTTCTCAGTCTAGCGGTAGTACTATTCACGTCAGCGTGTCAATATGGTCTCCCATTCCTAGCAAAATGCACCCCTTGTGATTCATCACTTCCAGAGTCAGAACTCTGCCCCACCAATGGAAGGTCTGGAAATTTCAAACAATTCAATTGCCCACCTGGCCACTACAATGATCTTGCTACTCTACTGCTTACGACTAATGACGATGCTGTTCGAAACATATTCTCAACTAACACACCTCATGAATATCAAACCTCCTCCCTCATAATTTTCTTTGCACTATATTGCATATTAGGACTGATTACTTTCGGAATTGCCGTGCCGACTGGACTCTTCCTCCCAATCATCCTTATGGGCTCGGCTTACGGCCGCCTTGTTGGTATGTTAATGGGACCTCATACAAAAATTGACCAAGGACTGTTTGCTGTACTTGGTGCAGCCTCCCTCATGGCTGGTTCCATGAGGATGACTGTATCCCTTTGTGTGATTTTCCTTGAACTTACCAGCAATCTTCTCCTACTACCAATAACAATGATTGTTCTCCTAATAGCCAAAACTGTTGGAGATTGCTTCAACCCAAGCATCTATGAGATTATACTGCATTTAAAAGGTCTTCCTTTCATGGATGCAAATCCTGAGTCATGGATGAGAAACCTCACTGTCGGCGAGCTTGTAGATGTAAAACCGGCAGTGATTTCCCTCCAAGGAATAGAAAAGGTAGCCAAGATAGTAGATGTATTGAAAAATACTACACATAATGGTTTCCCCGTGATGGATGATGGGGTAGTACCACCAATAGGACAGGCCAATGGGGCAACGGAACTGCATGGACTAATTTTAAGAGCACACCTTATCCAAGCATTAAAGAAGAAATTCTTCTTAAAAGAGAGAAGAAGAACAGAGGAATGGGAAGTGAGAGAGAAATTTACCTGGGTCGAGCTGGCCGAGAGAGAAGGGAAAATTGAAGAAGTGGCTATAACAAGGGAAGAAATGGAAATGTTTGTTGATCTACATCCTCTCACCAATACAACTCCATTTACTGTGCTAGAGAGCATATCAGTTGCAAAAGCAATGATCCTCTTCAGGCAGGTTGGACTTCGTCATCTGCTTGTAGTTCCGAAATATCAGGCATCAGGGGTATGCCCTGTAATCGGGATATTGACCAGACAGGATCTACTAGCCTACAACATTCTGACAGTCTTTCCTCACCTGGCAAAATCTAAGAACAGACAGAAGAAAAATTGA 2385 0.4143 MGESSLNLLESATKNIKMEEEVEREEEQEIDPESSNPLNQRLIKRNRTLSSSPLALVGEKVSYIESLDYETNENDLFKDGWRSRSRIEVLQYIFMKWVLAFLVGLLTGIIATLINLAVENIAGYKFLAVLKYINRERYLEGFLYFMGINFVLTFVAAILCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTMIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYKVKWRWLRYFNNDRDRRDLITCGASSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFCTAVVVVILRAFIEICNSGKCGLFGAGGLIMFDVSNVTVRYNVMDILPVAVIGIIGGLLGSLYNHLLHKVLRLYNLINQKGKIHKLLLSLAVVLFTSACQYGLPFLAKCTPCDSSLPESELCPTNGRSGNFKQFNCPPGHYNDLATLLLTTNDDAVRNIFSTNTPHEYQTSSLIIFFALYCILGLITFGIAVPTGLFLPIILMGSAYGRLVGMLMGPHTKIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTSNLLLLPITMIVLLIAKTVGDCFNPSIYEIILHLKGLPFMDANPESWMRNLTVGELVDVKPAVISLQGIEKVAKIVDVLKNTTHNGFPVMDDGVVPPIGQANGATELHGLILRAHLIQALKKKFFLKERRRTEEWEVREKFTWVELAEREGKIEEVAITREEMEMFVDLHPLTNTTPFTVLESISVAKAMILFRQVGLRHLLVVPKYQASGVCPVIGILTRQDLLAYNILTVFPHLAKSKNRQKKN 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00771 794 Pfam Voltage gated chloride channel 153 568 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo3g00771 794 PRINTS Plant CLC chloride channel signature 313 320 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo3g00771 794 PRINTS Plant CLC chloride channel signature 295 305 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo3g00771 794 PRINTS Plant CLC chloride channel signature 70 78 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo3g00771 794 PRINTS Plant CLC chloride channel signature 281 289 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo3g00771 794 PRINTS Plant CLC chloride channel signature 439 455 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo3g00771 794 Gene3D - 590 780 IPR046342 -
Mepo3g00771 794 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 17 779 - -
Mepo3g00771 794 PRINTS Chloride channel signature 487 507 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo3g00771 794 PRINTS Chloride channel signature 537 556 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo3g00771 794 PRINTS Chloride channel signature 196 215 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo3g00771 794 PRINTS Chloride channel signature 575 589 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo3g00771 794 PRINTS Chloride channel signature 260 279 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo3g00771 794 PRINTS Chloride channel signature 165 182 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo3g00771 794 PRINTS Chloride channel signature 519 535 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo3g00771 794 Pfam CBS domain 723 775 IPR000644 -
Mepo3g00771 794 FunFam Chloride channel ClC3 88 406 - -
Mepo3g00771 794 MobiDBLite consensus disorder prediction 17 37 - -
Mepo3g00771 794 CDD ClC_6_like 65 588 - -
Mepo3g00771 794 SUPERFAMILY CBS-domain pair 592 775 IPR046342 -
Mepo3g00771 794 ProSiteProfiles CBS domain profile. 721 787 IPR000644 -
Mepo3g00771 794 SUPERFAMILY Clc chloride channel 74 590 IPR014743 -
Mepo3g00771 794 CDD CBS_pair_voltage-gated_CLC_euk_bac 608 775 - -
Mepo3g00771 794 SMART cbs_1 724 777 IPR000644 -
Mepo3g00771 794 SMART cbs_1 610 669 IPR000644 -
Mepo3g00771 794 Gene3D Clc chloride channel 88 589 - -
Mepo3g00771 794 Coils Coil 8 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00771 Mepo-Chr3 10819506 10824787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00771 31 788 Ion Channels AT3G27170 79.288 0.0 1237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00771 K05016 - gmx:100788620 1357.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00771 3 10819506 10824787 Mepo3g00771 3 10819506 10824787 ECH
Mepo3g00771 3 10819506 10824787 Mepo5g03222 5 39335627 39340961 PCT