Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00759 ATGTCAGCCTCTCTTCCACCAAATCGCTTTTCCAAAAGCATCCACAATCAAACAATGAGTCGGAAAGAATTGTCAAAGATTTCACCATCGCCGGTTTCATTGGCCACTCTACTTGACCGTGAACTTCGAGAAGAGAAAGGTGTAAAAAGTTTTGCTAAGTATGGAGAAGATAGCATGGCTAAGAAAGGAGAAGATTATGGTCTGATCAAAACATGTTGCCACCGGGTTCCTGGGGATCCATCAACTGCGTTTTCGGTCTTTGCAATTTTTGATGGGCATAGTGGCATATCAGCCGCAGTTTATGCAAAAGAAAACTTACTAAATAATGTTTTGAAGGCAATACCGCAAGATATTATCAGCAGCAGCAGGGATGCATGGCTACATGCCCTTCCTCGTGCTCTAGTGGCTGGTTTTGTGAGGACTGACATGGATTTTCAGAGTATCAAGGGAGAAATGTCTGGAACGACAGCTACATTAGTTGTGGTTGATGAGTGTGTTGTCACTGTTGCATCTGTAGGTGATTCCCGTTGCATATTAGTAGATACTGAAGGAGGAGGCGTAGTTTCTATCCTTACGGTTGATCACAGACTGGAAGATAATGTGGAAGAAAGGGAACGTGTTATTGCAAGTGGTGGTGAAGTAAAAAGACACGATTATCGTGGTGGCCCTCTTCGCATTTGGCCTGGTGGATTATGTCTATCTAGATCCATAGGAGACGCAGATCTAGGGAAATATATTGTTCCAATACCACAAGTTAAGCAAGTCAAACTACTTTCCAATGGTGGCGGTGGAAGGCTTATCATAGCCTCTGATGGTGTTTGGGATGCTTTATCGAATGAGATGGCAGCAGCAGCAGCATGTCGGGGTGTAGCTGCAGAATTTGCTGCAAAGCTAGTGGTTGAGGAAGCTGTAATATCTAAAGGCTTGAAAGATGATACATCATGCATTGTTGTAGATATTCCTTCTGATCACCTCCCTGTATTACAACCAAATTCAACTACACGGAAGAAATTATATAATGTGCTAAAACCGCTTCTTTTTCCTTTTCGAAAGAAATCTAAGAACTCTACAAACAAAGGTACCACCAGCAAGGTTGGTGTTGTCGTGGAAGAGTTATTTGATGAGGGTTCTGTGTTTATAGAAAGGTTTGGCGATGATTTTTCACTTAAGAACAACTCTGATCAGATTTTCAGCTGTGAGATTTGCCAAGTGGATCAACGCCCTGGAAATGGTATATCAAGACCGTTGAATTCTCCATAG 1260 0.4238 MSASLPPNRFSKSIHNQTMSRKELSKISPSPVSLATLLDRELREEKGVKSFAKYGEDSMAKKGEDYGLIKTCCHRVPGDPSTAFSVFAIFDGHSGISAAVYAKENLLNNVLKAIPQDIISSSRDAWLHALPRALVAGFVRTDMDFQSIKGEMSGTTATLVVVDECVVTVASVGDSRCILVDTEGGGVVSILTVDHRLEDNVEERERVIASGGEVKRHDYRGGPLRIWPGGLCLSRSIGDADLGKYIVPIPQVKQVKLLSNGGGGRLIIASDGVWDALSNEMAAAAACRGVAAEFAAKLVVEEAVISKGLKDDTSCIVVDIPSDHLPVLQPNSTTRKKLYNVLKPLLFPFRKKSKNSTNKGTTSKVGVVVEELFDEGSVFIERFGDDFSLKNNSDQIFSCEICQVDQRPGNGISRPLNSP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00759 419 Pfam Protein phosphatase 2C 79 304 IPR001932 -
Mepo3g00759 419 SUPERFAMILY PP2C-like 61 321 IPR036457 -
Mepo3g00759 419 SMART PP2C_4 41 318 IPR001932 -
Mepo3g00759 419 MobiDBLite consensus disorder prediction 1 27 - -
Mepo3g00759 419 Gene3D - 50 325 IPR036457 -
Mepo3g00759 419 CDD PP2Cc 61 320 IPR001932 -
Mepo3g00759 419 ProSiteProfiles PPM-type phosphatase domain profile. 65 320 IPR001932 -
Mepo3g00759 419 PANTHER PROTEIN PHOSPHATASE 46 319 IPR015655 GO:0004722|GO:0006470
Mepo3g00759 419 SMART PP2C_SIG_2 68 320 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00759 Mepo-Chr3 10697113 10698372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00759 19 408 PP2C-type Phosphatase Gene Family AT1G09160 60.553 1.68e-149 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00759 - - gmx:100807886 454.136