Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00756 ATGGCGAATAATACGAGTGGCGTTAGAAAAGGTGCATGGACATATGAAGAAGACAACTGTCTCAAAGCCTACATTCTCAAGTATGGTGAAGGAAAATGGCATTTAATTCCTGAAAGAACAGTACAAGATTCAAATAAAGATCGTTATATTCCCATATATCAAGATGACTCACCAGAGACTATGGTTCCAAATCAAATTGATGGAGATTATGCTTCTGCTGTACAACCAAGTCTTGGTAATGTCCAAATACCGTGTGCAATGTGGTCAGACAATTTATTGGACATGGGGGAACAAGCAAGCAGTGAGAAAATTGCCTCATGCTCTTCATTACAAGAAGAGAACAACTTGAACATGGATTTTCCTGATGACTCCTTTTGGGATTTCAACTTCTCTGATTTTGAATTTCTTCGAGATCTTTAA 420 0.3786 MANNTSGVRKGAWTYEEDNCLKAYILKYGEGKWHLIPERTVQDSNKDRYIPIYQDDSPETMVPNQIDGDYASAVQPSLGNVQIPCAMWSDNLLDMGEQASSEKIASCSSLQEENNLNMDFPDDSFWDFNFSDFEFLRDL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00756 139 SUPERFAMILY Homeodomain-like 6 39 IPR009057 -
Mepo3g00756 139 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 39 IPR017930 -
Mepo3g00756 139 Gene3D - 1 69 - -
Mepo3g00756 139 ProSiteProfiles Myb-like domain profile. 5 53 IPR001005 -
Mepo3g00756 139 CDD SANT 12 49 IPR001005 -
Mepo3g00756 139 Pfam Myb-like DNA-binding domain 10 39 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00756 Mepo-Chr3 10656423 10658902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00756 1 39 MYB Transcription Factor Family AT1G56650 58.974 3.40e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g00756 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00756 - K09422 mtr:25480603 80.8777