Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00733 ATGATCTGGAAAGGGTGGTGCGGATGGCTAAAGTCGATCGTCGCACCACCACCAACTGTTGTCTACATGTTGAAGGCAAAAACTTGGATGAAAAGGGAAAGGGGTTGGTGTGCTGCTTGCAAGAGTCAAAGAAGAAGGTGCCCTCCTGATTGCATTTTCTCTCCATATTTCCCTCCCATTGATCCTCAAAGATTTGCTTCTGTTCACCGAATCTATGGTGGTGGCAATGTCGGAAAAATGCTTCAGCAATTGCCTCACTATGTAAGACACCAAGCTGCAAATTCTATGTATTTAGAAGCACAATGTAGGATTCAAGATCCTGTTTATGGATGTGTTGGGATTATCTCTAAACTATCTCAACAAATTCAAGATACAGAAGTTGAGTTGGCCAAAATCAAAACTCAGATTGCTTATCATAAACTCCATAATCAACATTTTGAAGCTGAATCAAACTTCAATGTCTTGCCACTACAAAGTAACAACATGGAGCAGATTCAATGGCCTAATCAAACTCCTAATTGGTTCAATTAG 531 0.4049 MIWKGWCGWLKSIVAPPPTVVYMLKAKTWMKRERGWCAACKSQRRRCPPDCIFSPYFPPIDPQRFASVHRIYGGGNVGKMLQQLPHYVRHQAANSMYLEAQCRIQDPVYGCVGIISKLSQQIQDTEVELAKIKTQIAYHKLHNQHFEAESNFNVLPLQSNNMEQIQWPNQTPNWFN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00733 176 ProSiteProfiles LOB domain profile. 35 136 IPR004883 -
Mepo3g00733 176 Pfam Lateral organ boundaries (LOB) domain 37 133 IPR004883 -
Mepo3g00733 176 Coils Coil 115 135 - -
Mepo3g00733 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 36 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00733 Mepo-Chr3 10261056 10263204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00733 37 137 AS2 family AT3G26660 67.327 1.95e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g00733 LOB 1.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00733 - - mtr:25497793 228.024