Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00732 ATGTGCAAGAAGGGGAAGAAGAAGATGAACGAAGAATCAGTAGCCAATTTGAAGATGATGGAGAATCATAACAATGAGAGCAAGCGAAAGGCAATCGTGCTGGAAGAGTCCCATGTTGAAACTCAGAATTCTAAGACTCCCCAAAAAGATGTTGCTGAAGAAGAATCAACTGATTCATCCAAAGACATATCTCCATTTCTACTTTTTGGATTCATTGTTGATCACAGGAAAGCAATTAAAAATGCTTACTCATGCAAATTTTGTAGCAGAAAATTCACTAGTCCACAGGCATTAGGTGGCCATCAAAGTTCTCACAAATTAGAGAGAAGTCTCAAAAAAAAGATCCAAGGGATAAGTCTAAACACCATCACTCCATTTCATATGGGGCGTGGATATCAATATTATGGATTTAACAATATGATTCAAAATGCAGGGTCATCAAACTTTTATGCAGGAAATTTGTATGGTGCATTGCAACATATTCCGGAGATAGATGAAGCGAATGAGGCTGATCAAAGCATTATGAATCAAAAAGTTACTATGTCTAAGATTGAAGTTGGTAAAGTTTTAGAGGGAGGTGCTGTTAGTGATGTAGTTGATCAGGGAGACAAAGAGACTCAAGAGGAGGAAGCATCTAAGATTGATTTGACCCTTAAGCTTTGA 663 0.3756 MCKKGKKKMNEESVANLKMMENHNNESKRKAIVLEESHVETQNSKTPQKDVAEEESTDSSKDISPFLLFGFIVDHRKAIKNAYSCKFCSRKFTSPQALGGHQSSHKLERSLKKKIQGISLNTITPFHMGRGYQYYGFNNMIQNAGSSNFYAGNLYGALQHIPEIDEANEADQSIMNQKVTMSKIEVGKVLEGGAVSDVVDQGDKETQEEEASKIDLTLKL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00732 220 MobiDBLite consensus disorder prediction 1 58 - -
Mepo3g00732 220 SUPERFAMILY beta-beta-alpha zinc fingers 81 111 IPR036236 -
Mepo3g00732 220 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Mepo3g00732 220 Pfam C2H2-type zinc finger 82 106 - -
Mepo3g00732 220 MobiDBLite consensus disorder prediction 201 220 - -
Mepo3g00732 220 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 7 149 IPR044246 GO:0009788
Mepo3g00732 220 MobiDBLite consensus disorder prediction 22 36 - -
Mepo3g00732 220 MobiDBLite consensus disorder prediction 199 220 - -
Mepo3g00732 220 Gene3D Classic Zinc Finger 56 123 - -
Mepo3g00732 220 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00732 Mepo-Chr3 10255034 10255899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00732 82 151 C2H2 Transcription Factor Family AT5G57520 46.341 2.47e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g00732 zf-C2H2_6 2.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00732 - - mtr:120577076 376.326