Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00716 ATGGAGAACAATTATTCCATGTTGTTTCCTTGTCCTCCTTCTTCAAGCTACCAAATTCCAACGAGTGGTTTGAATGGTCAAAGCTCAAATGCATTTCTTGGTTTGAAACCTACTACTAATAATGAAATTAGTGTTACTCATGACCATGAAGATGTGAAAGGAGAAGAAGGAAGTGTTAATGTTATTATTGATCAACAAGGTGTTAAAAAGAAAGGTGAGAAAAAGGCTAAGAAGCCTAAATATGCTTTTCAAACTAGGAGTCAAGTTGATATACTTGATGATGGTTATAGATGGAGGAAATATGGCCAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTACTATAGGTGCACACATCAAGGGTGCAATGTAAAGAAACAAGTGCAACGGTTAACCAAAGATGAGGGAGTAGTGGTGACAACATATGAAGGAGTGCATACTCACCCTATTGAGAAGACAACCGATAACTTTGAGCATATTTTGAGTCAGATGCAAATATACACTCCCTTCTAA 516 0.3682 MENNYSMLFPCPPSSSYQIPTSGLNGQSSNAFLGLKPTTNNEISVTHDHEDVKGEEGSVNVIIDQQGVKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00716 171 SMART WRKY_cls 92 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00716 171 ProSiteProfiles WRKY domain profile. 87 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00716 171 SUPERFAMILY WRKY DNA-binding domain 84 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g00716 171 Pfam WRKY DNA -binding domain 93 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g00716 171 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 154 IPR044810 GO:0003700
Mepo3g00716 171 Gene3D WRKY domain 75 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g00716 171 FunFam WRKY transcription factor 57 78 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00716 Mepo-Chr3 9968402 9970248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00716 80 171 WRKY Transcription Factor Family AT5G13080 86.957 2.60e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g00716 WRKY 1.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00716 - - psat:127128225 278.1