Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00696 ATGCCTTCATCATTTTGCATGAGATATATGAAAGAAAATGGAACTGATGCCTTAGAGAAACTCATTGCCAACAAGCACACAATGTGTAGCCCTGATGCAGAAGTGAGAAATGAAATCATAGCTACTGATGATAAAGATATACTAATGACAAATGACGAAAGACACGAAACAGAGAACAAAGACATCATAAATTTGGAAGCTATTGAGAAAAAAGAAATTCCTGCTACCAACCAAGATATTCCTGTCATTCCTGAAATTGAACCAAGTCAAAATCCATCATCAGTCACAGTGGAAACTAAAGGAACAGCAGAGAGTGACAGAGCTGGTGGAGAGTTTCCAAAGGGTTCTACTTTTACACAAAAGGAAATGCAGAAAAAGTGGACTTGTGCTTTATGTTCGGTAACAACTACAAGCAAGAAAGACTTGAATTCCCACCTCACTGGGAGGAAACACAGAGATACTATTGAAGCTTTATCAATAGCAAAGAAGCAACCTACCCTGAAGAAGCAAAAGGACGCGGAAGGGACAAATGAAATCATAGCCACTGATAATAAAGAAATACTAAAGACAAATGGAGAAAGACTCGAAACAGAGAACAAAGACATCAACGATTTGGAGGCTATTGAGAACAAGGAATTTCCTTCAACCGAGAAAAGAACCTATGCTAATATTGTGGCAAGTCAAACGGCATCATCAGCCATAATAGAAACCAAAGGAACATCAGAGAGTGTCACAGCTTGTGGAGAGGTTCCTCAGAGTTCTTCACAGAAGGCAGTGCAGAAAGAGTGGACTTGTGCTTTATGTTTGGTAACGGTTACGTGCGAGAAAACATTGATTTCCCACCTCAGGGGAAGGAGACACAGGGAAACTATTGAAGCATTGAAAGCAAAGAAGCAACCTACCCTGCAAAAGAACCTATCAGAACATATTAAGATGATTAATTCCAAAGTAATATGTAAAGTCTGTAATATTATGCTTCCAAGTGAGGACTACGTGGCCTCTCACATAAAAGGGTGGAAGCACTTGTCTAATATTAAAAGTTGA 1044 0.3918 MPSSFCMRYMKENGTDALEKLIANKHTMCSPDAEVRNEIIATDDKDILMTNDERHETENKDIINLEAIEKKEIPATNQDIPVIPEIEPSQNPSSVTVETKGTAESDRAGGEFPKGSTFTQKEMQKKWTCALCSVTTTSKKDLNSHLTGRKHRDTIEALSIAKKQPTLKKQKDAEGTNEIIATDNKEILKTNGERLETENKDINDLEAIENKEFPSTEKRTYANIVASQTASSAIIETKGTSESVTACGEVPQSSSQKAVQKEWTCALCLVTVTCEKTLISHLRGRRHRETIEALKAKKQPTLQKNLSEHIKMINSKVICKVCNIMLPSEDYVASHIKGWKHLSNIKS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00696 347 SUPERFAMILY beta-beta-alpha zinc fingers 120 159 IPR036236 -
Mepo3g00696 347 SMART ZnF_U1_5 314 347 IPR003604 GO:0003676|GO:0008270
Mepo3g00696 347 SMART ZnF_U1_5 260 294 IPR003604 GO:0003676|GO:0008270
Mepo3g00696 347 SMART ZnF_U1_5 124 158 IPR003604 GO:0003676|GO:0008270
Mepo3g00696 347 SMART c2h2final6 317 341 IPR013087 -
Mepo3g00696 347 SMART c2h2final6 263 287 IPR013087 -
Mepo3g00696 347 SMART c2h2final6 127 151 IPR013087 -
Mepo3g00696 347 Pfam Zinc-finger of C2H2 type 263 287 - -
Mepo3g00696 347 Pfam Zinc-finger of C2H2 type 319 341 - -
Mepo3g00696 347 Pfam Zinc-finger of C2H2 type 127 151 - -
Mepo3g00696 347 SUPERFAMILY beta-beta-alpha zinc fingers 309 346 IPR036236 -
Mepo3g00696 347 Gene3D Classic Zinc Finger 293 347 - -
Mepo3g00696 347 Gene3D Classic Zinc Finger 247 292 - -
Mepo3g00696 347 Gene3D Classic Zinc Finger 112 156 - -
Mepo3g00696 347 SUPERFAMILY beta-beta-alpha zinc fingers 252 299 IPR036236 -
Mepo3g00696 347 MobiDBLite consensus disorder prediction 86 101 - -
Mepo3g00696 347 PANTHER OS06G0651300 PROTEIN-RELATED 234 346 - -
Mepo3g00696 347 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00696 Mepo-Chr3 9493229 9496115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00696 263 345 C2H2 Transcription Factor Family AT2G19380 29.293 3.71e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g00696 zf-met 1.4e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00696 - - psat:127105426 374.785