Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00691 ATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTAAGAGACTTATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTGATACTCATAAGAGGAAGAAACGTTGCAACCGTCACACTGCTAATCAGATCCAAAGGCTTGAAGCGGTGTTTAAGACATGTTCATATCCTGATGAAAAACAAAGGTTGCAGTTAGGCAGGGAATTAGCCATGGATCCTACCAAGATCAAATTTTGGTTTCAGAATAGAAGGACTCAGATGAAGACACAACATGAAAGAGATGATAATTGTACACTCATAGAAGAGAATGATAAAATAAGATCCGAGAATAAAGTTATGAGGGAAGCCCTTAAAAATGTTATCTGCAGCACTTGTGATGGACAAAAGTTGAGAATTGAAAATGCTCGACTCAAAGAAGAGCTTGTTAGAGTATCTAGCATTGCAGCTGGATACACTGGAAAATCACTGCAGCACCTTCTACCAGGAAGTTCATCAACATTGCCAAATGTTCCTTATGATCAACCTGCTGGTCTCTCTAATAAGGAAAAATCACTCATGTTTGACATTGCTACAAATGCAATGCAAGATCTGGTTTTGCTTATGGAAACTAATGAGCCTTTATGGATGAAATCAAACACTGATGGAAGAGACACTCTTAACCTTGAAACCTATGAAACAATGTTCCCTAGGGCTAATAATCGGTTAAAGAATCCCAATATTCGCATCGAAGCTTCTAGAAATTCTGGTGATGTTATCATGAATGCCTTGACCTTGGTTGAAATGTTTATGGATCCTAACAAGTGGATGGAGCTATTTCCAACAATTGTGACAATGGCAAACACTATTGAAGTTATATCTTCTCGGACGAAGGATGGTCTTAGTGGTTCTTTGCAATTGATGTATGAAGAGTTGCAAGTGCTTTCACCACTTGTTCCTATTAGAGAATTCTACTTCCTACGTTACTGTAAACAATTTGAGAAAGGATGGGCAATAGTTGATGTTTCATATGAGAATTCTACTTCCTCATAA 1023 0.3822 MEHHSEGSVSSKRLMEHHSEGSVSSDTHKRKKRCNRHTANQIQRLEAVFKTCSYPDEKQRLQLGRELAMDPTKIKFWFQNRRTQMKTQHERDDNCTLIEENDKIRSENKVMREALKNVICSTCDGQKLRIENARLKEELVRVSSIAAGYTGKSLQHLLPGSSSTLPNVPYDQPAGLSNKEKSLMFDIATNAMQDLVLLMETNEPLWMKSNTDGRDTLNLETYETMFPRANNRLKNPNIRIEASRNSGDVIMNALTLVEMFMDPNKWMELFPTIVTMANTIEVISSRTKDGLSGSLQLMYEELQVLSPLVPIREFYFLRYCKQFEKGWAIVDVSYENSTSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00691 340 SUPERFAMILY Homeodomain-like 15 88 IPR009057 -
Mepo3g00691 340 SMART HOX_1 29 92 IPR001356 GO:0003677
Mepo3g00691 340 Pfam START domain 187 337 IPR002913 GO:0008289
Mepo3g00691 340 FunFam Homeobox-leucine zipper protein HDG1 17 104 - -
Mepo3g00691 340 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 29 337 IPR042160 -
Mepo3g00691 340 Pfam Homeodomain 31 86 IPR001356 GO:0003677
Mepo3g00691 340 Gene3D - 15 100 - -
Mepo3g00691 340 SUPERFAMILY Bet v1-like 180 336 - -
Mepo3g00691 340 CDD START_ArGLABRA2_like 181 336 - -
Mepo3g00691 340 ProSiteProfiles 'Homeobox' domain profile. 28 88 IPR001356 GO:0003677
Mepo3g00691 340 MobiDBLite consensus disorder prediction 1 36 - -
Mepo3g00691 340 ProSiteProfiles START domain profile. 177 340 IPR002913 GO:0008289
Mepo3g00691 340 CDD homeodomain 30 89 IPR001356 GO:0003677
Mepo3g00691 340 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00691 Mepo-Chr3 9447780 9450287 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00691 26 335 Homeobox Transcription Factor Family AT1G73360 50.556 2.94e-109 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo3g00691 START 1.5e-23 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00691 K09338 - gmx:100809075 422.165