Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00684 ATGACTCGCTCCCAGCGTGCCCCAGACACATGGATGGGCCCATGTATCTCTCCCACTCCACAAGATCAAGGCGATTCTTTCCAGACCATTGAAGTCGTGAACACGAAGGAGAATGAAGATCAACCCTCAAACGCCAATGTTGATAACTATATCGATTTTGTGATGCTATCAAACAATGCTTCCGTTCGTGGGTCGAAGGTGCAAGAGCTAGAACTTTTTAGCCCTATTCAAGTTGGTTCGTTATCTTGTTTTGCTAAAAACGATAATGAAGAGAAATATAAGAACAAACATGGTCAACCCTCAAGATCAAATTCCAACAAGTCTATTGATTTTGTCCAGCTCTCTAATGATCATCTGGTTTGTAGAACGTCGAAGGTACAAGCGTACGATTTTATTAGCACTATTAAAGTGGAAAAGAAGAGTTGGGATTCAAGGTCTTTTGCATGCTCCTATTGCAATGCACAATATTCTACATTGCAAGCATTAGGAGAACACCAAAACGCTCATAAAGCGGTATGTGCATTTGAAAAACAACATAAACAAATGTATTATGGTAGTTTTTTAAGTTTTGGGCAGCCTCAATATAACTCTTATTTTAAGTATCCTGGAACTCATTTTCCACCTTATAATTATGGGGTACTTGGGGTTAGAATGGAGTCAACAATTCAAAAACAACATTATACCAGCCCTAGGATTACAACACGTAGGCTTGGGTATAGTTATGGTGCTTTGTCTTTGCAAGAGATATTAAACCCTTCTCTTGTTAGCTTGAGAAATAATATTGAGGATAGAATTCTAGGTATTGATGGAGCAACTACTTCAAGTATTGGAGATTCTTCTACCATGGATGATGTTCATTCAAAGTCAAACATTGAAGAAGAACCCTCCAATTCTACATCTTCTGAGCTGGATTTAACACTTTTTAAATGTTATTATAGCTATTGCGCAAGGGGATCACGTTTTCAAGACGGCGCACCTACCCTAGCAGAGCGTTCTCTCCAAACAAAAGATTATCAACTTTTTCGAAATCTTACGTGA 1038 0.3863 MTRSQRAPDTWMGPCISPTPQDQGDSFQTIEVVNTKENEDQPSNANVDNYIDFVMLSNNASVRGSKVQELELFSPIQVGSLSCFAKNDNEEKYKNKHGQPSRSNSNKSIDFVQLSNDHLVCRTSKVQAYDFISTIKVEKKSWDSRSFACSYCNAQYSTLQALGEHQNAHKAVCAFEKQHKQMYYGSFLSFGQPQYNSYFKYPGTHFPPYNYGVLGVRMESTIQKQHYTSPRITTRRLGYSYGALSLQEILNPSLVSLRNNIEDRILGIDGATTSSIGDSSTMDDVHSKSNIEEEPSNSTSSELDLTLFKCYYSYCARGSRFQDGAPTLAERSLQTKDYQLFRNLT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00684 345 MobiDBLite consensus disorder prediction 277 298 - -
Mepo3g00684 345 ProSiteProfiles Zinc finger C2H2 type domain profile. 147 169 IPR013087 -
Mepo3g00684 345 MobiDBLite consensus disorder prediction 1 25 - -
Mepo3g00684 345 Pfam C2H2-type zinc finger 147 171 - -
Mepo3g00684 345 ProSitePatterns Zinc finger C2H2 type domain signature. 149 169 IPR013087 -
Mepo3g00684 345 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 37 307 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00684 Mepo-Chr3 9331690 9340588 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00684 144 242 C2H2 Transcription Factor Family AT5G01860 33.981 7.79e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00684 - - mtr:25497735 236.113