Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00679 ATGGCATCCAAATCCACTACCCTCTCTGCCACTTCACAAGATCAAGATGATTCTTCTTCCCACACAAAAGAAGTTGTGAACATGAAGGAGAATGAAGATCAAGCCGCAAACTCCAACTCCAACAAGGCTACCGATTTCGTTAAGCTACCGCAAGACGATTCGGTTTCCAAGTTTAAGATGCATGAGGGAAGTTTATTTAGACCTTATCAATCTGGTTCATCATCTTCTTTGGCTAATAAAAACAATGAAGTCAAAGAAGATGAGAACAAACAACATCAATCCTCAAACACCAATTCCAACAAGTCTTTCGATTTCACAAAGCTATCAAAAGACTACTCGGTTTGCAAGTCGAAGGTGCAAGAGCGCGATTTCTTTAGCCCTATTCCAGCCGGTTCAACATCTCCTTTTCCACATAACAACAACGAAGGGAAAGGAGACAACAATGAAGAAAATAAATCGGATTCAAGGTCTTTTTCATGCACCTATTGCAAGGCAAAATTTTCTACCGCACAAGCGTTTGGTGGGCACCAAAATGCCCATAAAACGGAACGTGCATTAGAAAAGCAACGTCAACAAAGGTATGATCAAAATCCTTTAGGTTTGGGGGCGCAACCTCACTTTAACCCTTATTTTAGTTATCATAGTACTCTTTTTACACCTTATAATTATAGGTCACTCGGGGTTAGAATGGAATCAATGATTCAAAAACCACCTTATACTAGCACCAAAATTACCCCACATAGTGTTGGGTATGGTCATGGGACTTTGTGTTTGAACGAGATATTGAACCCTTCTCTTGTTAGATGGAGAAATAATATTGAGAGTAGTAATAGTAGGGCTGGAATGCTAGGTTTTGGTGGTGCAACTATTTCAAAGATTGAAGATGGTAATAAAATTAGGGCTATTCTAAACTATGGAGATTCTTCTACAAATATTGCTACAAGTTCAAACTCAAACAAAGACAAGGAAATTATTGTGGCTCCTACTTCTACCACAGATGATGTTGATAATCAAGAGCCAAATAACGAAGAAAATTCCGATTCAGAATCCTCTGAGCTTGATTTGTCACTCAAACTTTAA 1080 0.3861 MASKSTTLSATSQDQDDSSSHTKEVVNMKENEDQAANSNSNKATDFVKLPQDDSVSKFKMHEGSLFRPYQSGSSSSLANKNNEVKEDENKQHQSSNTNSNKSFDFTKLSKDYSVCKSKVQERDFFSPIPAGSTSPFPHNNNEGKGDNNEENKSDSRSFSCTYCKAKFSTAQAFGGHQNAHKTERALEKQRQQRYDQNPLGLGAQPHFNPYFSYHSTLFTPYNYRSLGVRMESMIQKPPYTSTKITPHSVGYGHGTLCLNEILNPSLVRWRNNIESSNSRAGMLGFGGATISKIEDGNKIRAILNYGDSSTNIATSSNSNKDKEIIVAPTSTTDDVDNQEPNNEENSDSESSELDLSLKL 359
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00679 359 Gene3D Classic Zinc Finger 146 199 - -
Mepo3g00679 359 MobiDBLite consensus disorder prediction 125 153 - -
Mepo3g00679 359 MobiDBLite consensus disorder prediction 31 47 - -
Mepo3g00679 359 ProSiteProfiles Zinc finger C2H2 type domain profile. 158 185 IPR013087 -
Mepo3g00679 359 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 80 359 IPR044246 GO:0009788
Mepo3g00679 359 MobiDBLite consensus disorder prediction 1 16 - -
Mepo3g00679 359 MobiDBLite consensus disorder prediction 312 336 - -
Mepo3g00679 359 ProSitePatterns Zinc finger C2H2 type domain signature. 160 180 IPR013087 -
Mepo3g00679 359 MobiDBLite consensus disorder prediction 1 103 - -
Mepo3g00679 359 MobiDBLite consensus disorder prediction 312 359 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mepo3g00679 Mepo-Chr3 9262606 9263685 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00679 151 192 C2H2 Transcription Factor Family AT5G01860 59.524 2.42e-12 63.9