Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00667 ATGGCTAAAACATTGAGAGAAAGCCCTGGAATCTTGATACTTGACGAAGCTCATAATCCTAGAAGCATTAAATCAAGGTTGAAGAAATGCTTAACGAAACTTCCTACAGAATTAAGAATATTAATTTCTGGCACTCTTTTTCAGAACAATTTCTGTGAATATTTCAATACACTTTGTTTAGTAAGACCGAAATTTGTTCACAAAGTGCTACAAGAGTTAGATTCTAAATACTTGAGGAGAGGTAATGGAGAGAAGAAAGCACAACATTTGCTTAAGGCGTGGCCAAGGATATTCTTCATGGGAAACATTGCTAGGAAAATCAACTCACACAATGATGAGGAAAAAATGCAGGGTCTACCTGTGCTGTGA 369 0.3631 MAKTLRESPGILILDEAHNPRSIKSRLKKCLTKLPTELRILISGTLFQNNFCEYFNTLCLVRPKFVHKVLQELDSKYLRRGNGEKKAQHLLKAWPRIFFMGNIARKINSHNDEEKMQGLPVL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00667 122 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 113 IPR044567 GO:0080188
Mepo3g00667 122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 77 IPR027417 -
Mepo3g00667 122 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 10 19 IPR002464 -
Mepo3g00667 122 Gene3D - 2 97 IPR038718 -
Mepo3g00667 122 Pfam SNF2-related domain 9 92 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00667 Mepo-Chr3 9176514 9176882 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mepo3g00667 SNF2_N 1.1e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00667 K10875 - gmx:100785036 172.555