Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00664 ATGTCTGAAGACAATAGGCCAAGTTTAATCTCAAAGACACTAGAAAATGGAGCTGCACAATACATTGTGAAACCTTTTTGTGCTGAAGACTTCAAAGATATTTGGAAATATGTTATGGAAGCAAAGAAAGAGAAACTTTTCATTGAAAGTTTATTTGTGAGAAGCGAAGAAGAAGAGACATCAAGTGAACCTAAGAACAAAAAGAAGCATTGCAAGAGAAAGAGTAAAGAACGCCAAGGAGAGAGAGATATTCAAGTTGTTAAGAAACAGAAGCTTGTTTGGACACCTTATCTCCACAAAATGTTTCTGCTTGCTATTAACCAAATTGGATTGGAAAAGGCTGTGCCAAAGAAAATTCTGGAGATCATGAATATACCAAACTTGACCAGAGAAAATGTAGCAAGTCACTTACAGAAGTATCGCATATTTCTGCGAGATGTTGCAGAGAAAGGAATGGTTGGAGGCATATCTCATAGAGCTCTAAGATCAAGGTTTGCATCAAGTCTTCCGATGTCTGTGATAAGAGAAATCGAAGAAAAAAGAACGAACAAACTTCATGCGCCAACACTTCAATATTTGCAAACACTGCCATATCAAACAAGAGGTGCAAACAATGTTTTTAACCATTTCAACCAATTTCCAACACATCATGTTGACCAATTCCCGTATACACAAAAAGGGTTGGCTCTACAAGATTTGGAACAAGTTAGGCTTGGAAAATCAAAGTTGGAAGTCGATGTTAGCTTTTCATCATGTAGAGGTGAACAAGGATTGATGGTTTCTTCTTCTTCTTCAAGTTTCTTACCAAGGGATTTTAAATTTGGTGACATTAGAAACCAAGATCATGGTGTTCAAAATTCAAACTTTGGATCTTTGATAAGCCCTAATGTTATGCCTCATAAGTTTACTTCTGATGTAAGAAACAATAACCCTTTTGGAATTCAGCTGAATAATGGAGCAGAAATGGTTGGAATTGGAACTATTAATAATGGATTAAGGGCTTCTAGTGCAATTAACCATAGTTTTTGCTTCAATGAAAGGGATCAAAATGAAAATATGATCTTTAGATCTTTTGTGAATGAAAAATTTGGTTTGGTTCCGGGAGGGAGTGGACGAGAGTTTCTAGTAGGATCAGTTAATAATGAAGGAAATGTTTCATAG 1161 0.3592 MSEDNRPSLISKTLENGAAQYIVKPFCAEDFKDIWKYVMEAKKEKLFIESLFVRSEEEETSSEPKNKKKHCKRKSKERQGERDIQVVKKQKLVWTPYLHKMFLLAINQIGLEKAVPKKILEIMNIPNLTRENVASHLQKYRIFLRDVAEKGMVGGISHRALRSRFASSLPMSVIREIEEKRTNKLHAPTLQYLQTLPYQTRGANNVFNHFNQFPTHHVDQFPYTQKGLALQDLEQVRLGKSKLEVDVSFSSCRGEQGLMVSSSSSSFLPRDFKFGDIRNQDHGVQNSNFGSLISPNVMPHKFTSDVRNNNPFGIQLNNGAEMVGIGTINNGLRASSAINHSFCFNERDQNENMIFRSFVNEKFGLVPGGSGREFLVGSVNNEGNVS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00664 386 FunFam Two-component response regulator 85 148 - -
Mepo3g00664 386 Gene3D - 86 146 - -
Mepo3g00664 386 MobiDBLite consensus disorder prediction 58 80 - -
Mepo3g00664 386 NCBIfam myb-like DNA-binding domain, SHAQKYF class 89 142 IPR006447 GO:0003677
Mepo3g00664 386 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 57 318 IPR044841 GO:0003700|GO:0006355
Mepo3g00664 386 SUPERFAMILY Homeodomain-like 87 146 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00664 Mepo-Chr3 9138288 9140869 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00664 1 195 Response Regulator Gene Family AT3G16857 33.473 3.37e-31 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g00664 Myb_DNA-binding 2.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00664 - - psat:127115658 416.772