Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00662 ATGAGTGCTGCAGTAGATCACAAAACAGGACAAGAGAAGATGGATTGCGAACTATCAAATATCAAAGTTTTGATTGTGGACCATGATGATGTTTATTTGGCATTTCTTACTAATATACTCATGGCATGGCAATACAAAGTTGTTACTGCCAAGGATGCTCGTCATGCTTTGGTCACTCTTCAAGAAAATGAAGGCTTGCTTGATCTCGTTATTACAGAGTTTCATCTGGTGGGAATGAATGGGTTAGAATTCCAAAAGCACATTAAAGATCAATTCCAGATACCTATAATAATTATGTCTGAAGACAATAGGCCAAGTTTAATCTCAAAGACACTAGAAAATGGAGCTGCACAATACATTGTGAAACCTTTTTGTGCTGAAGACTTCAAAGATATTTGGAAACATGTTATGGAAGCAAAGAAAGAGAAACTTTTTATTGAAAGTTTATTTGTGAGAAGCGAAGAAGAAGAGACATCAAGTGAACCTAAGAACAAAAAGAATCATTGCAAGAGAAAGAGTAAAGAATGCCAAGGAGAGAGAGATATTCAAGTTGTTAAGAAACAAAAGCTTGTTTGGACACCTTATCTCCACAAAATGTTTTTGCTTGCTATTAACCAAATTGGATTGGAAAAGGTTGTGCCAAAGAAAATTTTGGAGATCATGAATATACCTAACTTGACCAGAGAAAATGTAGCAAGTCACTTACAGAAGTATCGCATATTTCTGCGAGATGTTGAAGAGAAAGGAATGGTTGGAGGCATATCTCACAGATCTTTAAGATCAAGTTTTGCATCAGGTCTACCGAGTTCTGTGATCAGAGAAATCGAAGAAAAAAGAACAAACAAACTTCATGCGCCAACACACCAATATTTGCAAACACTGGCAAATCAAACAAGAGGTGCAAACAATGTTTTTCACCATTTCAACCAAATTCCAAAACATCATGTTGACCAATTCCCTTATTTCCAAAAAGGATTAGCTCTTCAAGATTTGGTTCAAGTTAGGCTTGGAAAATCAAAGTTGGAAGCCGATGTTGTTGCGGAGAATAATGGCCCTGGACAAAACAGGTTTGGAATAAGCTCTTCAAACCTTCCATCTTTTCAAGCAAAAAACTCATTCCATGATGGTGCTTCTACTAGCTTTTCATCATATAAAGGTGAACAAGGATTGAGGGTTTCTTCTTCTTCAAGTTTCTTAACAAGGGATTTTAAATTTGGTGACGTTAGAAACCAAAATCACGGTGTTAAAAATTCAAACTTTGGATCTTTGATAAGCACTAATGTCATGCCTCATAAGTTTACTTCTGATGTAAGAAACAATAATACTTTTGGAATTCAGCTGAATAATGGAGCAGAAATGGTTGGAATTGGAACTATGAACAATGGATTAAGGGCTTCTAGTGCAAATAATAATGAAAGGGGTCAAAATGTAAATATGAATTTTAGATCTTTTGTCAATGAAAATTTTGGTTTTCTTCAAGGAGGGTTTGGTTTGGATTCTATTTCAAATATTAGGGGAGGGAGTGGAAAAGAGTTTCTTGCAGAATCAGTTAATAATGAAGGAAATGTTTCAAAGAATAGACAATTTCCTCAGCATAAATTAGATGGATATGTTGTGGAAAATGAGCAAAATTTTAATGGTTCAACTTTCACTAATGAGGTTGAGTTCAACAAAATTGAATTCAACAATTCTGATTTCTTAATGGCTGATGACAAGAATCATCGTAACGAGTTGCAAGGAAATGAAGGATTTTCAAATGGGGAACCATCTAATAGGTTTTTGGAAGGCAAAGTGTCTAAAGCAAGCACCTCAGCTACTAATCTGGAATTTGATATGGATCTTGTTGAAGCCTTGTTTGGTACTATTGAAGACTAG 1875 0.3525 MSAAVDHKTGQEKMDCELSNIKVLIVDHDDVYLAFLTNILMAWQYKVVTAKDARHALVTLQENEGLLDLVITEFHLVGMNGLEFQKHIKDQFQIPIIIMSEDNRPSLISKTLENGAAQYIVKPFCAEDFKDIWKHVMEAKKEKLFIESLFVRSEEEETSSEPKNKKNHCKRKSKECQGERDIQVVKKQKLVWTPYLHKMFLLAINQIGLEKVVPKKILEIMNIPNLTRENVASHLQKYRIFLRDVEEKGMVGGISHRSLRSSFASGLPSSVIREIEEKRTNKLHAPTHQYLQTLANQTRGANNVFHHFNQIPKHHVDQFPYFQKGLALQDLVQVRLGKSKLEADVVAENNGPGQNRFGISSSNLPSFQAKNSFHDGASTSFSSYKGEQGLRVSSSSSFLTRDFKFGDVRNQNHGVKNSNFGSLISTNVMPHKFTSDVRNNNTFGIQLNNGAEMVGIGTMNNGLRASSANNNERGQNVNMNFRSFVNENFGFLQGGFGLDSISNIRGGSGKEFLAESVNNEGNVSKNRQFPQHKLDGYVVENEQNFNGSTFTNEVEFNKIEFNNSDFLMADDKNHRNELQGNEGFSNGEPSNRFLEGKVSKASTSATNLEFDMDLVEALFGTIED 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00662 624 Gene3D - 184 244 - -
Mepo3g00662 624 Gene3D - 19 151 - -
Mepo3g00662 624 FunFam Two-component response regulator 183 246 - -
Mepo3g00662 624 SUPERFAMILY Homeodomain-like 185 244 IPR009057 -
Mepo3g00662 624 SMART REC_2 21 133 IPR001789 GO:0000160
Mepo3g00662 624 Pfam Response regulator receiver domain 23 130 IPR001789 GO:0000160
Mepo3g00662 624 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 348 IPR045279 GO:0009736
Mepo3g00662 624 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Mepo3g00662 624 CDD REC_typeB_ARR-like 23 136 - -
Mepo3g00662 624 SUPERFAMILY CheY-like 19 139 IPR011006 -
Mepo3g00662 624 NCBIfam myb-like DNA-binding domain, SHAQKYF class 187 240 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00662 Mepo-Chr3 9117491 9125160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00662 21 263 Response Regulator Gene Family AT5G07210 35.294 3.20e-44 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g00662 Response_reg 4.9e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00662 - K14491 psat:127115658 593.578