Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00650 ATGGATTCCATCAAAAGAAGAAAGATTATTCACGAAGGACGTGCGGTGGGAATAGATCTTGGAACAACCTATTCTTGTGTTGCTGTGTGGCTTGATCAACACCAAAGAGTTGAGATTATTCACAATGATCAAGGAAACCGAACAACACCTTCTTTTGTTGCTTTCAACAATGAGCAAAGGTTGATTGGTGATGCTGCTAAGAATCAATCTGCTACTAACCCTGAAAACACTATCTTTGATGCTAAGAGATTAATTGGTAGGAAGTTTAGTGATCCGGTTGTTCAAAGAGATATATTGTTGTGGCCATTCAAGGTTGTTTCTGGTGTTAATGAGAAACCTACGATTACTGTTAAGTACAAGGGTCAAGAGAAGCACTTTTGTGCTGAGGAAATATCTTCTATGCTCCTTACAAAGATGCGAGAGGTTGCAGAGGCATATCTGGGGTCACCGGTCAAGAATGCTGTTGTTACTGTGCCAGCTTACTTCAATGATTCTCAGCGAAAGGCCACCATAGATGCTGGTACTATTGCCGGCCTTAATGTCATTCGGATAATCAATGAACCTACTGCGGCAGCTATTGCATATGGCCTTGACAAGAGAAATGACCGTGATGGTAACCGAAATATTTTTGTCTTTGATTTGGGTGGCGGTACTTTTGATGTGTCTATCCTCACAATTAAAGGTGATGTATTCGAAGTAAAAGCCACCGCAGGAAACACTCATCTTGGAGGCGAGGACTTCGATAACAGAATGGTGAACTATTTTGTTGAGGAGTTAAAAAAGAAGAATAAAGTGGACATCAGTCGGAACCCAAAATCCTTAAGGAGGTTGAGAACTGCTTGTGAGAGGGCAAAAAGAATACTCTCTTTTGCTTTTGTCACCACTGTTGAGGTAGATGCTTTATTCATGGGAATCGACTTTTCTTCATCAATCACTCGTGCCAAATTTGAGGAACTTAATATGGATTTTTTCAATGAGTGTATGAATATTGTTGACAGTTGTCTCAGGGATTCAAAGATATACAAGAGTAATATTGATGATATTGTTCTTGTGGGTGGCTCGTCTAGGATTCCCAAAGTGCAGGAACTATTGCTAGAATTTTTCAAGGGGAAGGAATTATTCATGGGTATCAACCCAGACGAGGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTATTTTGAGTGAAGGCTGTAAGAATGTCCCCAACTTGGTGCTACGAGATGTTACCCCTTTGTCACTTGGTATTTCTGTAAGTATTGAACATATGATGAGTGTGGTGATTCCTAGAAACACTTCCATACCTGTCAAGAAGACAGGTCGATATTTCACCCTTCATGATAACCAGTGCATTGCCAATTTTCTTGTTTATGAGGGTGAGAGACCAAGAGCTACTGACAATAATCTGCTTGGTTCATTTGGGCTTCGTTGTCTTCCAGGTCCCCGTGGCCAGCCCTTTGAGGTATGCTTTTCGATTGATGAAAATGGCATCCTAACTGTTGCTGCTAGGGAAATATCTACAGGGAATATGAACGCAATCACCATTACTAACAACAAAGACAGGTTGTCAATGTTCGACATTGAAAAAATGACTAAGGAAGCTGTGAAATATCATGTGGAAGATATGCAATTTTTAAAAAGGGCCAAGGTAATGTGTGCATTAGATTCTTGTGTTTACAATATGAAGAACGCTTTAAAGAAGAAGGATGTTAATCTGATTCTCTCCCCTCAAGAAATTGCGAAGATCAACAATGCAATTACTGTTGCTATGGATTTGCTTGATAAGAATAACAAAGAGAAAGAAATAGATGTTCTTGAGGGTCATCTGGAGGAGCTGGAGAGCATGTCGAAACAGCTTATATCCAAGGCTAATAATTTTATTTTTCTTGGATAA 1893 0.4004 MDSIKRRKIIHEGRAVGIDLGTTYSCVAVWLDQHQRVEIIHNDQGNRTTPSFVAFNNEQRLIGDAAKNQSATNPENTIFDAKRLIGRKFSDPVVQRDILLWPFKVVSGVNEKPTITVKYKGQEKHFCAEEISSMLLTKMREVAEAYLGSPVKNAVVTVPAYFNDSQRKATIDAGTIAGLNVIRIINEPTAAAIAYGLDKRNDRDGNRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDNRMVNYFVEELKKKNKVDISRNPKSLRRLRTACERAKRILSFAFVTTVEVDALFMGIDFSSSITRAKFEELNMDFFNECMNIVDSCLRDSKIYKSNIDDIVLVGGSSRIPKVQELLLEFFKGKELFMGINPDEAVAYGAAVQAAILSEGCKNVPNLVLRDVTPLSLGISVSIEHMMSVVIPRNTSIPVKKTGRYFTLHDNQCIANFLVYEGERPRATDNNLLGSFGLRCLPGPRGQPFEVCFSIDENGILTVAAREISTGNMNAITITNNKDRLSMFDIEKMTKEAVKYHVEDMQFLKRAKVMCALDSCVYNMKNALKKKDVNLILSPQEIAKINNAITVAMDLLDKNNKEKEIDVLEGHLEELESMSKQLISKANNFIFLG 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00650 630 FunFam heat shock 70 kDa protein-like 79 134 - -
Mepo3g00650 630 Gene3D - 200 374 - -
Mepo3g00650 630 FunFam Heat shock protein 70 16 207 - -
Mepo3g00650 630 Coils Coil 595 622 - -
Mepo3g00650 630 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 398 552 IPR029047 -
Mepo3g00650 630 FunFam Heat shock 70 kDa 243 326 - -
Mepo3g00650 630 PANTHER HEAT SHOCK PROTEIN 70KDA 15 584 IPR013126 GO:0005524|GO:0140662
Mepo3g00650 630 Pfam Hsp70 protein 15 622 IPR013126 GO:0005524|GO:0140662
Mepo3g00650 630 ProSitePatterns Heat shock hsp70 proteins family signature 3. 348 362 IPR018181 -
Mepo3g00650 630 PRINTS 70kDa heat shock protein signature 154 174 - -
Mepo3g00650 630 PRINTS 70kDa heat shock protein signature 377 397 - -
Mepo3g00650 630 PRINTS 70kDa heat shock protein signature 66 74 - -
Mepo3g00650 630 PRINTS 70kDa heat shock protein signature 345 361 - -
Mepo3g00650 630 PRINTS 70kDa heat shock protein signature 403 422 - -
Mepo3g00650 630 PRINTS 70kDa heat shock protein signature 14 27 - -
Mepo3g00650 630 PRINTS 70kDa heat shock protein signature 217 227 - -
Mepo3g00650 630 PRINTS 70kDa heat shock protein signature 44 56 - -
Mepo3g00650 630 PRINTS 70kDa heat shock protein signature 483 499 - -
Mepo3g00650 630 SUPERFAMILY Actin-like ATPase domain 15 199 IPR043129 -
Mepo3g00650 630 SUPERFAMILY Actin-like ATPase domain 204 395 IPR043129 -
Mepo3g00650 630 Gene3D - 16 392 - -
Mepo3g00650 630 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 400 550 IPR029047 -
Mepo3g00650 630 Gene3D Actin; Chain A, domain 4 243 326 - -
Mepo3g00650 630 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 553 623 IPR029048 -
Mepo3g00650 630 ProSitePatterns Heat shock hsp70 proteins family signature 2. 211 224 IPR018181 -
Mepo3g00650 630 Gene3D - 553 625 IPR029048 -
Mepo3g00650 630 Gene3D - 79 134 - -
Mepo3g00650 630 ProSitePatterns Heat shock hsp70 proteins family signature 1. 18 25 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00650 Mepo-Chr3 8980286 8982449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00650 12 622 Calmodulin-binding Proteins AT3G12580 63.355 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00650 K03283 - gmx:102667578 820.846