Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00648 ATGGCAAGAAAATACGACGGACTTGCTGTCGGAATAGACCTTGGAACAACATATTCTTGTGCTGCTGTTTGGCTTGATGATCACAATAGAGTTGAGATTATTCACAATGATCAAGGCAATAGAACAACACCTTCTGTTGTTGCTTTCACTGATTATCAAAGGTTGATTGGCAATGGGGCTGAGAATCAATCTGCTACCAACCCCGAAAACACTGTATTTGATTAA 225 0.4 MARKYDGLAVGIDLGTTYSCAAVWLDDHNRVEIIHNDQGNRTTPSVVAFTDYQRLIGNGAENQSATNPENTVFD 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00648 74 PRINTS 70kDa heat shock protein signature 60 68 - -
Mepo3g00648 74 PRINTS 70kDa heat shock protein signature 38 50 - -
Mepo3g00648 74 PRINTS 70kDa heat shock protein signature 8 21 - -
Mepo3g00648 74 PANTHER HEAT SHOCK PROTEIN 70KDA 9 74 IPR013126 GO:0005524|GO:0140662
Mepo3g00648 74 FunFam heat shock 70 kDa protein-like 3 74 - -
Mepo3g00648 74 Pfam Hsp70 protein 9 74 IPR013126 GO:0005524|GO:0140662
Mepo3g00648 74 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mepo3g00648 74 SUPERFAMILY Actin-like ATPase domain 9 74 IPR043129 -
Mepo3g00648 74 Gene3D - 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00648 Mepo-Chr3 8944822 8945141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00648 1 74 Calmodulin-binding Proteins AT3G12580 71.622 1.29e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00648 K03283 - mtr:11439799 150.984