Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00643 ATGGCCAAAAAACACAAGGGTCCAGCAATTGGAATTGACCTTGGCACAACGTATTCATGTGTAGCAGTTTCGCAGGGCCAAAACAATAGAGCAGAGATCATTCATAATGATCAAGGAAATAGAATTACACCTTCTTTTGTTGCTTTCACTAATGATCAAAGGTTGATTGGTGATGCTGCAAAAAATCAGGCTGCTTCTAACCCAACAAACACTGTCTTTGGTAATTTATCTTTCTATCTTCCTGCATGGTTTATTTATTATAGTAATTCGTAG 273 0.3736 MAKKHKGPAIGIDLGTTYSCVAVSQGQNNRAEIIHNDQGNRITPSFVAFTNDQRLIGDAAKNQAASNPTNTVFGNLSFYLPAWFIYYSNS 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00643 90 FunFam heat shock 70 kDa protein-like 3 79 - -
Mepo3g00643 90 SUPERFAMILY Actin-like ATPase domain 8 77 IPR043129 -
Mepo3g00643 90 Gene3D - 1 77 - -
Mepo3g00643 90 Pfam Hsp70 protein 9 73 IPR013126 GO:0005524|GO:0140662
Mepo3g00643 90 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mepo3g00643 90 PRINTS 70kDa heat shock protein signature 8 21 - -
Mepo3g00643 90 PRINTS 70kDa heat shock protein signature 38 50 - -
Mepo3g00643 90 PRINTS 70kDa heat shock protein signature 60 68 - -
Mepo3g00643 90 PANTHER HEAT SHOCK PROTEIN 70KDA 9 74 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00643 Mepo-Chr3 8898809 8899081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00643 1 73 Calmodulin-binding Proteins AT3G12580 75.342 3.16e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00643 K03283 - lja:Lj0g3v0174969.1 129.028