Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00632 ATGTTTGATTGGGTAATGGCTTATAACAAATATTGTTTAGGTGGAAATGCTGAAGAGAGAACTCCAGAACCAAAGCCAAGATGGAACCCAAAGCCACAGCAAATTCGCATTCTCGAAGCCATCTTCAACTCAGGGATGGTGAACCCACCAAGGGAGGAAATTACGAAGATACGTGAACAATTACAAGAGTTTGGTCAAGTTGGTGATGCCAATGTTTTTTACTGGTTTCAAAACCGCAAGTCTCGAAGCAAACAAAAGAAGAGATTCATCCACAACAAGAAACGAGAAACACAACAAAACTCCGGTCATCGAACACTCACATCACCACCCAACTCATCCTCATCATCTTCCTCTGATCATCAAAAAGCTTCTCCAAATGAAACAACAGTATCTAACAATATTGGATTAACCAATATTAATCATGGGATGATGGTGTTTCCTAATTCATCCGCAGTCCCTGTGTACCAAAACCAAGTTGATGCTTATTTTCACACCCCCGCTGAAACCGATTTACAACTACCTACACCCTCATTTTTCTCTTTCCCTGTGGAGAATCATATTAATGAAGAAGTAGTGCCTAATGCCATGACAATACCACATAGGTTTAATAACTTATCTGGTTTCATGAACTATGGAAGTGAAAATGGAATCTCCTCAATGGCTCAACCCTTACCTCAACAAAATGTTGATGTACCTTTGGTTAATAATGAGATCATCATGAACTATGGAAGTAAAAATGGAATCTCCTCAATGGAAGACCGATATGATCAAGAGAAGATTCAAGAGGAAGCAATGAATATGATTCACATGTACCAGCAAGACCCACAACTTAATTTTGGTGTTACTACAACATCAAGCAATGATGATGAGTCAGTTGATCTTGCTCCTCTTCCTCCCACTACCATTGGTGCACCTGTTGCTGTTCCATTCCCCATTATTGATCATCAACATCAAGGTTTTGGTGTGGAAGATGGAGCGGAAAAATGCACGGTGTTTACTAATAAGGACACCGTATTCAAGGTTGATGTTGGGCCCTTTAACATTCGTGCATCCTTTGGAGATGGAGCAGTTCTCCTTGATTCCTCTGGAACTCCAGTTCTAACCGATGAATGGGGTGTCACCCTCGACTCGCTCCACCATGGTGCTACTTATTTCCTGGTTTTTTTTCTCTCTTGTTCCATTGCAAACATTGTAGAAAAGTGA 1203 0.4073 MFDWVMAYNKYCLGGNAEERTPEPKPRWNPKPQQIRILEAIFNSGMVNPPREEITKIREQLQEFGQVGDANVFYWFQNRKSRSKQKKRFIHNKKRETQQNSGHRTLTSPPNSSSSSSSDHQKASPNETTVSNNIGLTNINHGMMVFPNSSAVPVYQNQVDAYFHTPAETDLQLPTPSFFSFPVENHINEEVVPNAMTIPHRFNNLSGFMNYGSENGISSMAQPLPQQNVDVPLVNNEIIMNYGSKNGISSMEDRYDQEKIQEEAMNMIHMYQQDPQLNFGVTTTSSNDDESVDLAPLPPTTIGAPVAVPFPIIDHQHQGFGVEDGAEKCTVFTNKDTVFKVDVGPFNIRASFGDGAVLLDSSGTPVLTDEWGVTLDSLHHGATYFLVFFLSCSIANIVEK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00632 400 PANTHER WUSCHEL-RELATED HOMEOBOX 9 15 387 IPR044557 GO:0003700|GO:0050793
Mepo3g00632 400 SMART HOX_1 23 90 IPR001356 GO:0003677
Mepo3g00632 400 MobiDBLite consensus disorder prediction 84 134 - -
Mepo3g00632 400 CDD homeodomain 24 87 IPR001356 GO:0003677
Mepo3g00632 400 FunFam WUSCHEL-related homeobox 11 25 92 - -
Mepo3g00632 400 Gene3D - 25 90 - -
Mepo3g00632 400 SUPERFAMILY Homeodomain-like 21 88 IPR009057 -
Mepo3g00632 400 ProSiteProfiles 'Homeobox' domain profile. 21 86 IPR001356 GO:0003677
Mepo3g00632 400 Pfam Homeodomain 25 85 IPR001356 GO:0003677
Mepo3g00632 400 MobiDBLite consensus disorder prediction 101 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00632 Mepo-Chr3 8721579 8724462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00632 305 387 Wox Gene Family AT5G45980 39.130 3.56e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo3g00632 Homeodomain 6.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00632 - - mtr:11439786 637.106