Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00602 ATGGGTTCTGAGAATGAGAACAAAGCAAGTGAGCTCTTTGTAGCTCAAGCTCACTTGTACAATCAGATATTCAGTTTCATGAGACCCGTGTCGATCAAGTGGGCTGTTGAACTTGGCATACCAGATATAATCCAAAATCATGGCAAACCTATTACTCTTCATGAGCTTGTCTCGGCTCTTCGAATTCCAGAAGCAAAAGCCGGTTGTGTTCATAGTGTCATGCGCTTATTGGCACACAATAAAATCTTTGCGATTGTGAAGATAGATGACAACATGGAAGCATATGCTCTTTCTCCAACATCAAAGCTTCTTGTGAAAGGAACTGATCATTGTTTAACTTCAATGGTTAAGATGGTAACAAACCCTACCGGTGTTGAATTATATTATCAATTGACCAAATGGACATCTAAGGAGGATCTCACAATCTTTGATACTACATTATGGGATTTCATTCAACAAAATCCGGCTTACGGGAAGCTATTCAATGATGCTATGGAAAGTGATTCTAATATGATGAGGTTTGCAATGAGTGATTGCAAATCAGTTTTTGAGAGCTTAACTTCTTTAGTTGATGTTGGAGGTGGAACCGGAAACACGGTTAAAATTATTTGTGAGGCGTTTCCTACGTTAAAATGTATAGTGTTCGACCTTCCAAACGTGGTAGAAGGATTAACGGGAAATAACTATCTGAGTTTTGTCGGCGGAAATATGTTTGAATCTATCCCTCAAGCTGATGCAATTTTACTAAAGTGGGTTTTACATAACTGGAATGATGATGATTGTGTCAAGATACTTAAAAGTTGTAAAGAAGCTGCTTCAAGGCAAATGAAAGGAGGAAAAGTGATCATAATAGACATTGTGATAAATGAAAAGCAAGATGAGCATGAAATAACAGAAGTCAAACTCTGCTTTGACATAACAATGATGGCTAATCACAATTCAAGAGAAAGAGATGAAAAAACATGGAAAAATATCATAACAGAAGCAGGATTCATGTGTTACAAAATATTTCCTATATTTGGTTTTAGGTCACTTATTGAACTTTCTGTTTAA 1053 0.3656 MGSENENKASELFVAQAHLYNQIFSFMRPVSIKWAVELGIPDIIQNHGKPITLHELVSALRIPEAKAGCVHSVMRLLAHNKIFAIVKIDDNMEAYALSPTSKLLVKGTDHCLTSMVKMVTNPTGVELYYQLTKWTSKEDLTIFDTTLWDFIQQNPAYGKLFNDAMESDSNMMRFAMSDCKSVFESLTSLVDVGGGTGNTVKIICEAFPTLKCIVFDLPNVVEGLTGNNYLSFVGGNMFESIPQADAILLKWVLHNWNDDDCVKILKSCKEAASRQMKGGKVIIIDIVINEKQDEHEITEVKLCFDITMMANHNSRERDEKTWKNIITEAGFMCYKIFPIFGFRSLIELSV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00602 350 Gene3D Vaccinia Virus protein VP39 105 349 IPR029063 -
Mepo3g00602 350 Pfam O-methyltransferase domain 141 331 IPR001077 GO:0008171
Mepo3g00602 350 FunFam O-methyltransferase ZRP4 106 350 - -
Mepo3g00602 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 347 IPR029063 -
Mepo3g00602 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 350 IPR016461 GO:0008168
Mepo3g00602 350 SUPERFAMILY "Winged helix" DNA-binding domain 10 108 IPR036390 -
Mepo3g00602 350 PANTHER O-METHYLTRANSFERASE 12 333 IPR016461 GO:0008168
Mepo3g00602 350 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Mepo3g00602 350 Gene3D - 1 104 IPR036388 -
Mepo3g00602 350 PIRSF O-mtase 1 349 IPR016461 GO:0008168
Mepo3g00602 350 FunFam Coniferyl alcohol 9-O-methyltransferase 2 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00602 Mepo-Chr3 8337182 8338734 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00602 1 348 Monolignol Biosynthesis Gene Families AT5G54160 31.868 1.57e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00602 K22588 K13262 gmx:100791825 398.667