Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00590 ATGGCTTTCACTACCTCAACCCTAGCTGAAAAGAAGAACAAGGTTTTGTTCATATTGGGTGCAACTGGAACTGGGAAAACTAAACTTTCCATCAACTTGGGTACTCATTACCCCGCTGAAATCATAAACTCAGACAAAATTCAAGTCTACAAGGGTCTTGATATTGTCACGAATAAGGTACCGGAATCTGAACGTTGTTCGATTCCGCATCACTTATTAGGCATCATCGATGATCCTGAATATGATTTTACTATGAATGATTTCTGCAAGCATGTGCTTGATTCCCTTGATCTGATAATTGGCAATGGGCACCTACCTATTATTGTAGGAGGGTCCAATTCTTATCTTAAAAAATTAGTTGAGGACCCATCCATTGCATTTTTTTCAAAATATGATAGTTGCTTCATTTGGATCGACGTGTCTTTGCCTACTCTATTTCAATATGTAGGCAAAAGAGTCGATGAAATGGTAGAGGCGGGGATGGTCGATGAGATTCGACAATATTTTGTACCTGGGGCAGACAACACAAAGGGAATTAGAAGGGCTATTGGGGTTCCTGAGCTTGATTCTTTTTTTGAGATAGAAAAGAAAAATGGCATTGACGATGCTCAAAAGGAGAAGATTTTGAAGGAAGCTATTGGAAAAACGAAACACAACACTTGCATATTGGCTAAAAATCAACTCTTGAAGATCCATAACATGGCTGATATGTTTGGATCAATGTTGTATAAAATTGATTCTACGAAAGTCTTTGAGGCCCTTTTAAGGGGAGAAGATTATAAACATTTGCATCAAGAGATTGTCATTATGCCAAGCAAGGAGATAGTGAAGAGATTCCTAGAGGAGACGACTGATGGATTTGGATATGAAAAATATTCAAATGAAAATGGAAAACATGCACCCAATGGTGTTTGA 915 0.3803 MAFTTSTLAEKKNKVLFILGATGTGKTKLSINLGTHYPAEIINSDKIQVYKGLDIVTNKVPESERCSIPHHLLGIIDDPEYDFTMNDFCKHVLDSLDLIIGNGHLPIIVGGSNSYLKKLVEDPSIAFFSKYDSCFIWIDVSLPTLFQYVGKRVDEMVEAGMVDEIRQYFVPGADNTKGIRRAIGVPELDSFFEIEKKNGIDDAQKEKILKEAIGKTKHNTCILAKNQLLKIHNMADMFGSMLYKIDSTKVFEALLRGEDYKHLHQEIVIMPSKEIVKRFLEETTDGFGYEKYSNENGKHAPNGV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00590 304 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 142 242 - -
Mepo3g00590 304 Gene3D - 12 280 IPR027417 -
Mepo3g00590 304 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 12 280 IPR039657 -
Mepo3g00590 304 FunFam Adenylate isopentenyltransferase 5, chloroplastic 142 242 - -
Mepo3g00590 304 Pfam IPP transferase 48 122 - -
Mepo3g00590 304 Pfam IPP transferase 130 228 - -
Mepo3g00590 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 172 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00590 Mepo-Chr3 8200874 8201788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00590 96 286 C2H2 Transcription Factor Family AT2G27760 30.556 1.85e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00590 K10760 - mtr:11405692 542.347