Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00585 ATGCCCGCCGGCCTCGACATGTCACTCGACCAAATCACCACTCACCGCCGCACCGCCTCCAACCGACCAAATCGCCACCTCGGCGTTCGCAACTCCTCAATCAGAATCACTCCGTACTCCATTTCTCTCTCTCAGATGCTTGAAAGAGAAGCTTTGCGAAGAAGCAGTGTTGATGATGTTCCTCAAGAAATGGTTTTGGATCAACCTCGAGAGAAACCTATCACTAAACTCTATTTGTCTAACTTGGATGATATGGTTTCCAACGAAGACATTCATCTGTTGTTCTCGGAAGAGGGTGAGTTGGAAAGTTACTCCATTCATTATGATCAATTTGGGAGATCAAAAGGAACAGCTGAAGTTGTCTTTACAAGGCAGTCTGAGGCTTTAGCTGCTCTCAAGAGGTACAACAATATGAAGCTTGATGGAAAGACATTGCAAATTGAGCTTGTTGGAGCAAGTTTGGTTACTCCTGCTGCTGCGCCTCTTGGACAAAGTAGCTTACTAGGAAAACCAAATGATGTCTTTGCAAGGTGCAAAATTCCAAGTCCTGGTCTTATGAGCTCTGGAACAAATTTGGTTACTCCTGCTGATATGTCTCTTGGTCGAAGTAGCTTACTGGGAAAGCCAAATGATGTCTTCGCAAGGTGTCAGATTCCGTTTCCTGGTTTCATGAGCTATGGAACAACTGCTGATATGCCTCTTGGTCGAAGTAGCTTACCTGGAAGACCAAATGATGTCTATGTAAGGGAAGAGAGAAAATTTGGAGGTAGCAGGTACAATAATAGCTCTGCACCAACACATGGCTATCTTCCAAGAAAGAATGATCATACACTAAAAGCAAAACGCCAGATTCCAACGGTGTCTGCGAAAGATCTTGATGAAGACTTGGAGAGGTATCGCTCAGAGGCTATGAAGGAAAACAAAGGAAAAGGAAAGGGAAATCATGATTGA 951 0.4427 MPAGLDMSLDQITTHRRTASNRPNRHLGVRNSSIRITPYSISLSQMLEREALRRSSVDDVPQEMVLDQPREKPITKLYLSNLDDMVSNEDIHLLFSEEGELESYSIHYDQFGRSKGTAEVVFTRQSEALAALKRYNNMKLDGKTLQIELVGASLVTPAAAPLGQSSLLGKPNDVFARCKIPSPGLMSSGTNLVTPADMSLGRSSLLGKPNDVFARCQIPFPGFMSYGTTADMPLGRSSLPGRPNDVYVREERKFGGSRYNNSSAPTHGYLPRKNDHTLKAKRQIPTVSAKDLDEDLERYRSEAMKENKGKGKGNHD 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00585 316 Gene3D - 15 149 IPR012677 -
Mepo3g00585 316 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 77 145 IPR000504 GO:0003723
Mepo3g00585 316 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 75 152 IPR000504 GO:0003723
Mepo3g00585 316 MobiDBLite consensus disorder prediction 254 316 - -
Mepo3g00585 316 SMART rrm1_1 76 148 IPR000504 GO:0003723
Mepo3g00585 316 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 304 - -
Mepo3g00585 316 SUPERFAMILY RNA-binding domain, RBD 63 149 IPR035979 GO:0003676
Mepo3g00585 316 MobiDBLite consensus disorder prediction 272 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00585 Mepo-Chr3 8150705 8153986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00585 77 150 Eukaryotic Initiation Factors Gene Family AT2G23350 39.189 1.69e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00585 K12881 - gmx:100785926 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00585 3 8150705 8153986 Mepo3g00585 3 8150705 8153986 ECH