LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g00584	ATGTTGAACCATTTAGTGATGGAGTTTAAGAGGAAGAACAAAGTGGACATTGGTGGAAACCCGAGGGCCCTTAGGAGGTTGAGAACTGCATGCGAGAGGGCTAAAAGGACATTGTCATTTGATACTGAGACTACAATTGACATAGATGCTATACACGACGGAATTGACTTCAATATGTTATTAACTCGGGCCAAGTTTGAGCAACTCAATATGGATCTCTTTGAAAATTGTTTGGCGATTGTCAAGAGTTGTCTTACTGATGCTATGATGGAGAAGAGCAGTGTAGATGATGTTGTACTTGTTGGTGGATCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGGACTTTTTTGAGGGGAAGGATCTTTGCAGCAGCATCAACCCGGATGAAGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTTTGCTTTGCGATGGCATTAAGAATGTTCCTAACTTGGTGCTGCAAGATGTTACTCCACTGTCTCTTGGCACGTCAGTAGTTAAAGATATCATGTATGTAGTGATTCCTAAGAACACTTCTTTTCCAATAAAGAGGAAACAAACATTTTGCACACTTGCAGATGACCAATCTGCTGTCAAAATTGATGTTTATGAGGGTGAGAGAATGGTTGTAGGTGAGAACAACTTGCTTGGTTTGTTTGATCTCAAAGTTCGTCGTGCACCTCGTGGACTTAATATCCAGGTATGTTTTGATATAGATGCTGATGGTACATTAAATGTTTCCGCAGAGGAAGAAACAAGTGGTAATAAGAAAGAAATTACAGTTACGAATGAAAATGGAAGACTATCTAGGGAAGAAATTGAGAAAAAGATTAAAGAAGCTGAGTACTTCAAGTCCGAAGACATGAAGTTTATTGAGAAGGTTAGAGCAGTGAATGCTTTGGATGATTACATTTATAGAATGAGGAAAGTAATGAAGGATGATAGTATTACTTCAAAGCTCACTCCTGTTGAGAAAGTGGAAATCAATTCTGCAATCATAAAGGGGGAAAATTTGATTGATGACAAGCAGCAGTACGAGACATTTGTGTTTGCGGACTTTCTGAGGGAGCTTGAGAGCACATGTGAATCAGCTTTGAAAAGGATCAATATAGATTCCTCTGAGAAGTGA	1137	0.3984	MLNHLVMEFKRKNKVDIGGNPRALRRLRTACERAKRTLSFDTETTIDIDAIHDGIDFNMLLTRAKFEQLNMDLFENCLAIVKSCLTDAMMEKSSVDDVVLVGGSSRIPKVQQLLQDFFEGKDLCSSINPDEAVAYGAAVQAALLCDGIKNVPNLVLQDVTPLSLGTSVVKDIMYVVIPKNTSFPIKRKQTFCTLADDQSAVKIDVYEGERMVVGENNLLGLFDLKVRRAPRGLNIQVCFDIDADGTLNVSAEEETSGNKKEITVTNENGRLSREEIEKKIKEAEYFKSEDMKFIEKVRAVNALDDYIYRMRKVMKDDSITSKLTPVEKVEINSAIIKGENLIDDKQQYETFVFADFLRELESTCESALKRINIDSSEK	378

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g00584	378	Gene3D	Actin; Chain A, domain 4	1	76	-	-
	Mepo3g00584	378	SUPERFAMILY	Heat shock protein 70kD (HSP70), C-terminal subdomain	299	370	IPR029048	-
	Mepo3g00584	378	Gene3D	-	125	142	-	-
	Mepo3g00584	378	Gene3D	-	77	124	-	-
	Mepo3g00584	378	FunFam	Heat shock 70 kDa protein	148	300	-	-
	Mepo3g00584	378	SUPERFAMILY	Heat shock protein 70kD (HSP70), peptide-binding domain	150	304	IPR029047	-
	Mepo3g00584	378	ProSitePatterns	Heat shock hsp70 proteins family signature 3.	98	112	IPR018181	-
	Mepo3g00584	378	PRINTS	70kDa heat shock protein signature	127	147	-	-
	Mepo3g00584	378	PRINTS	70kDa heat shock protein signature	232	248	-	-
	Mepo3g00584	378	PRINTS	70kDa heat shock protein signature	153	172	-	-
	Mepo3g00584	378	PRINTS	70kDa heat shock protein signature	95	111	-	-
	Mepo3g00584	378	SUPERFAMILY	Actin-like ATPase domain	2	144	IPR043129	-
	Mepo3g00584	378	Pfam	Hsp70 protein	2	347	IPR013126	GO:0005524\|GO:0140662
	Mepo3g00584	378	FunFam	Heat shock 70 kDa	1	76	-	-
	Mepo3g00584	378	Gene3D	Substrate Binding Domain Of DNAk; Chain A, domain 1	149	300	IPR029047	-
	Mepo3g00584	378	PANTHER	HEAT SHOCK PROTEIN 70KDA	1	326	IPR013126	GO:0005524\|GO:0140662
	Mepo3g00584	378	Gene3D	-	301	372	IPR029048	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g00584	Mepo-Chr3	8145390	8146625	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g00584	1	371	Calmodulin-binding Proteins	AT3G12580	58.824	4.88e-148	431

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g00584	K03283		-	gmx:102667578	422.165