Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00574 ATGGCAACAAAATATGAGGGAGTTGCGATAGGAATTGACCTTGGCACAACTTACTCGTGTGTTGGAGTATGGCAAGAACAAACCAATCGTGTCGAAATAATTCACAATGATCAAGGAAACAAAACAACACCTTCTTGTGTTGCTTTTACTAATTCTCAAAGATTGATTGGTGATGCTGCCAAAAATCAAGCTGCCTCAAACCCAACCAACACTGTCTTTGATGCAAAGAGGTTGATTGGAAGAAAATATAGCGATTCGGTTATTCAGAATGATATTCTGATGTGGCCATTTAAGGTTATTGCTGGTACTGATGACAAACCTGAGATTGTTGTTAAGTATAAGGGTGAGGAAAAGCGCTTTTGTGCCGAGGAAATATCATCTATGGTACTCGTGAAGATGCGCGAGATTGCAGAGAAGTTTTTGGAGTCACCTGTCAAGAATGCAGTAGTTACTGTTCCTGCTTATTTCAATGATTCTCAACGAAAAGCCACAAAAGATGCTGGTGCTATTGCTGGACTGAATGTAATGTGGATAATCAACGAACCAACTTCTGCTGCCCTTGCATATGGCCTACAAAAGAGAGCAAATAATGTTGGAAAACGAAATGTGTTCATCTTTGATCTTGGCGGTGGCACTTTTGATGTGTCTCTTCTTACACTCACAAATGATAGCTTTGATGTAAAGGCCACTGCCGGAGATACTCACTTAGGAGGAGAGGACTTCGATAACAGAATGGTGAACCACTTAGTGAAGGAGTTTCAGAGGAAAAATAAAGTTGACATAAGTGGAAACGCAAGGGCTCTTAGGAGGTTGAGAACTGCTTCTGAGAGGGCTAAAAGGACTCTCTCGTTTGATATTGAGGCTACAATTGACTTGGATGCTATATACGAGGGAATTGACTTGAGGCTACAAGTTTGA 918 0.4096 MATKYEGVAIGIDLGTTYSCVGVWQEQTNRVEIIHNDQGNKTTPSCVAFTNSQRLIGDAAKNQAASNPTNTVFDAKRLIGRKYSDSVIQNDILMWPFKVIAGTDDKPEIVVKYKGEEKRFCAEEISSMVLVKMREIAEKFLESPVKNAVVTVPAYFNDSQRKATKDAGAIAGLNVMWIINEPTSAALAYGLQKRANNVGKRNVFIFDLGGGTFDVSLLTLTNDSFDVKATAGDTHLGGEDFDNRMVNHLVKEFQRKNKVDISGNARALRRLRTASERAKRTLSFDIEATIDLDAIYEGIDLRLQV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00574 305 Gene3D - 10 193 - -
Mepo3g00574 305 FunFam heat shock 70 kDa protein-like 73 128 - -
Mepo3g00574 305 Gene3D Actin; Chain A, domain 4 237 304 - -
Mepo3g00574 305 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Mepo3g00574 305 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Mepo3g00574 305 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mepo3g00574 305 PRINTS 70kDa heat shock protein signature 60 68 - -
Mepo3g00574 305 PRINTS 70kDa heat shock protein signature 8 21 - -
Mepo3g00574 305 PRINTS 70kDa heat shock protein signature 38 50 - -
Mepo3g00574 305 PRINTS 70kDa heat shock protein signature 211 221 - -
Mepo3g00574 305 PRINTS 70kDa heat shock protein signature 148 168 - -
Mepo3g00574 305 Gene3D - 73 128 - -
Mepo3g00574 305 FunFam Heat shock protein 70 10 201 - -
Mepo3g00574 305 Pfam Hsp70 protein 9 301 IPR013126 GO:0005524|GO:0140662
Mepo3g00574 305 PANTHER HEAT SHOCK PROTEIN 70KDA 9 302 IPR013126 GO:0005524|GO:0140662
Mepo3g00574 305 SUPERFAMILY Actin-like ATPase domain 200 304 IPR043129 -
Mepo3g00574 305 FunFam Heat shock 70 kDa 237 305 - -
Mepo3g00574 305 Gene3D - 194 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00574 Mepo-Chr3 8067510 8068514 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00574 1 301 Calmodulin-binding Proteins AT3G12580 76.080 1.17e-165 473