Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00573 ATGGAGTGGCAGAAGAATGGTTTTAATCAGAACAGCAATGTTGGAATGATGCAAGTAAATGTGATGACCGATGAACAAGTTGAAACTCTTCGGAAACAAATAGCAGTTTATTCTGTAATCTCTGAGCAACTCATTCAAACACATAAAATCTTATCTTCTCAACAAGATCTCACTCTCACGGGATCTACTAGGCTGAGGCAGCGTTGGACACCAACACCTGTGCAGCTTCAAAGTTTGGAGCGAATATTTGAAGCTGAGACGGGGACTCCAAGTAAGGAAAAGATAAAGGAGATAACCGCTGATTTAACCAAGCACGGGCAGATTTCAGAGACCAGTGTGTATAATTGGTTTCAGAATAGGCGTGCTAGGTCAAAGGGAAAGCAGCAAAATAATGTTAATGATGAACCGGAAGTAGAGACCGAGGTTGATTCCAATGACAAGAAAACTGAACCGGAGATTGTTGCATCTCAGTCTGCTCAAAATTTGTGCAGCCAGTACTTAGCTGACTTGAATTCAGAATCAGATGACAGTTTACGACCCTCTAGAAACTGA 552 0.4167 MEWQKNGFNQNSNVGMMQVNVMTDEQVETLRKQIAVYSVISEQLIQTHKILSSQQDLTLTGSTRLRQRWTPTPVQLQSLERIFEAETGTPSKEKIKEITADLTKHGQISETSVYNWFQNRRARSKGKQQNNVNDEPEVETEVDSNDKKTEPEIVASQSAQNLCSQYLADLNSESDDSLRPSRN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00573 183 CDD homeodomain 66 128 IPR001356 GO:0003677
Mepo3g00573 183 ProSiteProfiles 'Homeobox' domain profile. 62 127 IPR001356 GO:0003677
Mepo3g00573 183 Pfam Homeodomain 66 125 IPR001356 GO:0003677
Mepo3g00573 183 SUPERFAMILY Homeodomain-like 63 129 IPR009057 -
Mepo3g00573 183 Gene3D - 67 134 - -
Mepo3g00573 183 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 165 IPR044559 GO:0003700
Mepo3g00573 183 SMART HOX_1 64 131 IPR001356 GO:0003677
Mepo3g00573 183 MobiDBLite consensus disorder prediction 121 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00573 Mepo-Chr3 8062500 8063237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00573 17 148 Wox Gene Family AT4G35550 57.237 4.65e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo3g00573 Homeodomain 4.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00573 - - tpra:123891516 204.142