Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00566 ATGTCATTTCAGAATAAAGGCTTCTGGAGTCCCCGAGATGTTGGCTGCATAGCTGAAGAAAATGTTGGATTTGATAATTCTTCAAGAGTTGAACCAAAGAGAAGTCATCAGTGGTTTGTGGATACAAGTGAACCTCAAATATTCAACAATAAGAAACAAGCAGTTGAAGATGTTAGTGATAGGTCAGTTTCAGCAATGAATGTTTCTCAATGGGAAACCAGTTCGGGATTTCACCCGGTCACTGGCCAATTTTCTGACCGTCCTTTTGGTTCTGGTTTTGTACGGTCTAACAATTCAGCTGATAAAAACATTCCATCAATTGGAAGTGGAAATATAAACACGGGAAGAAATGATTTTGGAAATCAAAATGGTAATGATTCATCTATTGGGCTATCAATGTCTCATTCCATAGGAGTTCCTTCACCATCTCTAAATTTTGGTGGTATAAGGAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACCATGGCACGCCAGCAGCTGATAACAATATATTTTCGGTAGGTTCTGTTTACAATAAGAATGATGACAATATTACATCAGGCCCAACTTATGCCAATGGAAGCGACAACACCATTGCTGCGGGTCACATCTTCAATAAAGGGGACGGGAATTTTTTGTTGATGGGTCACAATTATGGCAAGGGAGATGAACATATTTTATCAATGGGTCGGTCCTTTGACAGGGGGGATGGAAATTTCATAACAATGGGTCAGTCATATGGAAAGGAAGATGACAATTTGATATCTCTGGGAACCTCATATTCTATGGGGCATGAGAACATTACATCAATGGGTCCAACCTATGGGAAATCGGGAGAAAATTTCACAACTATGGCTCCTTCCTATGATAAGGTGGATTCAAACATGGCTTCAACAATTCCATTGTTTGACAGAGGCAACTCAAGTTCTTTACCTTTGAGTCAAAACCTGAGTAATTGTCATAACAGTACCATTTCTTTTGGAGGTTTTCATGTTAACCCTCAACTGAATCACTCCGCTGGAATCATTAATAGTTCTGATCCATTAATGGCCAACCAGAGCTCAGCTCAAGGTGTCGATAGCCAGAAGGATCTGAGTGAATCAAACCCTAATACACCTGTAAATAGCACTCCAAAATCTAATGCAAAAAATGATACTGTTGTTAAAAACAAAGTACCAAAGACGGCAAAGAAAACTTCTACCAACAACTTCCCTGCAAATGTCAAAAGTTTGTTGTCAACTGGTATTTTTGATGGCATTCCGGTAAAATATTGTACATGGTCAAGGGAGAAAAATCTTCAAGGAGTCATAAAAGGAACTGGATACTTGTGTTCATGTGATATCTGCAAGGGGCAAAAGGCTCTTAATGCATATGAATTTGAGCGTCACGCCGGGGCCAAGTCAAAACATCCCAACAGTCACATATTCTTTGAGAATGGAAAGTCCGTCTATGCTGTTGTTCAAGAGCTGAAAAACATTCCTCAGGAGATGCTTTTTGATGCTATTCAAACTGTGACAGGAGCCACCATCAACCAAAGGAACTTTCGTACTTGGAAAGCATCATACCAAGCTGCTACACTTGAGCTTCAGCGCATCTATGGAAAGGATGATGATGCGGCAATACCATCATAA 1632 0.3977 MSFQNKGFWSPRDVGCIAEENVGFDNSSRVEPKRSHQWFVDTSEPQIFNNKKQAVEDVSDRSVSAMNVSQWETSSGFHPVTGQFSDRPFGSGFVRSNNSADKNIPSIGSGNINTGRNDFGNQNGNDSSIGLSMSHSIGVPSPSLNFGGIRKVKVNQVRDSDHGTPAADNNIFSVGSVYNKNDDNITSGPTYANGSDNTIAAGHIFNKGDGNFLLMGHNYGKGDEHILSMGRSFDRGDGNFITMGQSYGKEDDNLISLGTSYSMGHENITSMGPTYGKSGENFTTMAPSYDKVDSNMASTIPLFDRGNSSSLPLSQNLSNCHNSTISFGGFHVNPQLNHSAGIINSSDPLMANQSSAQGVDSQKDLSESNPNTPVNSTPKSNAKNDTVVKNKVPKTAKKTSTNNFPANVKSLLSTGIFDGIPVKYCTWSREKNLQGVIKGTGYLCSCDICKGQKALNAYEFERHAGAKSKHPNSHIFFENGKSVYAVVQELKNIPQEMLFDAIQTVTGATINQRNFRTWKASYQAATLELQRIYGKDDDAAIPS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00566 543 MobiDBLite consensus disorder prediction 343 404 - -
Mepo3g00566 543 PANTHER AUTOIMMUNE REGULATOR 9 491 - -
Mepo3g00566 543 Pfam Tify domain binding domain 435 490 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00566 Mepo-Chr3 7974014 7977698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00566 394 523 PHD Transcription Factor Family AT3G53680 50.769 6.26e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00566 - - gmx:100782217 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00566 3 7974014 7977698 Mepo3g00566 3 7974014 7977698 ECH
Mepo4g02668 4 35335899 35338985 Mepo3g00566 3 7974014 7977698 ECH